Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 FAM8A4P-201ENST00000435433 1213 ntBASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 DUX4L47-201ENST00000566374 394 ntBASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 AC018735.1-201ENST00000437208 1502 ntBASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 AL513477.1-201ENST00000602865 2407 ntBASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CCDC62Q6P9F0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCDC62Q6P9F0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCDC62Q6P9F0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 MIR663B-201ENST00000408361 115 ntBASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 HSPB1P2-201ENST00000448722 546 ntBASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 AC004898.1-201ENST00000451057 766 ntBASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 COX5BP1-201ENST00000507622 393 ntBASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CCDC62Q6P9F0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 RN7SL713P-201ENST00000582127 302 ntBASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 AC073413.1-201ENST00000603927 732 ntBASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 AC103702.1-201ENST00000548801 2630 ntBASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC62Q6P9F0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms