Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 AC023024.2-201ENST00000623561 1993 ntBASIC14.4□□□□□ -0.1
PRAMEF2O60811 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 TCAF2P1-201ENST00000291129 2421 ntBASIC14.4□□□□□ -0.1
PRAMEF2O60811 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.4□□□□□ -0.1
PRAMEF2O60811 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.4□□□□□ -0.1
PRAMEF2O60811 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 SOCS2P1-201ENST00000417727 557 ntBASIC14.4□□□□□ -0.1
PRAMEF2O60811 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.4□□□□□ -0.1
PRAMEF2O60811 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.4□□□□□ -0.1
PRAMEF2O60811 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.4□□□□□ -0.1
PRAMEF2O60811 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.4□□□□□ -0.1
PRAMEF2O60811 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.4□□□□□ -0.1
PRAMEF2O60811 ENPP7P5-201ENST00000541031 1031 ntBASIC14.4□□□□□ -0.1
PRAMEF2O60811 AL359711.2-201ENST00000563105 872 ntBASIC14.4□□□□□ -0.1
PRAMEF2O60811 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.4□□□□□ -0.1
PRAMEF2O60811 AC233724.13-201ENST00000598383 410 ntBASIC14.4□□□□□ -0.1
PRAMEF2O60811 AC133552.6-201ENST00000613406 534 ntBASIC14.4□□□□□ -0.1
PRAMEF2O60811 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.4□□□□□ -0.1
PRAMEF2O60811 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.4□□□□□ -0.1
PRAMEF2O60811 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PRAMEF2O60811 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PRAMEF2O60811 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PRAMEF2O60811 AC006486.2-201ENST00000624246 2199 ntBASIC14.4□□□□□ -0.1
PRAMEF2O60811 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.4□□□□□ -0.1
PRAMEF2O60811 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PRAMEF2O60811 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF2O60811 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.4□□□□□ -0.11
PRAMEF2O60811 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF2O60811 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF2O60811 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF2O60811 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF2O60811 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF2O60811 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF2O60811 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF2O60811 ACTG1P3-201ENST00000431775 1114 ntBASIC14.39□□□□□ -0.11
PRAMEF2O60811 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 KRT223P-202ENST00000449164 1292 ntBASIC14.39□□□□□ -0.11
PRAMEF2O60811 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 USP32P1-208ENST00000506594 1164 ntBASIC14.39□□□□□ -0.11
PRAMEF2O60811 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 SLC25A47P1-201ENST00000531577 414 ntBASIC14.39□□□□□ -0.11
PRAMEF2O60811 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.39□□□□□ -0.11
PRAMEF2O60811 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF2O60811 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF2O60811 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF2O60811 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF2O60811 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF2O60811 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF2O60811 CICP11-201ENST00000434745 2827 ntBASIC14.39□□□□□ -0.11
PRAMEF2O60811 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF2O60811 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF2O60811 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF2O60811 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 INTS4P2-202ENST00000614726 2019 ntBASIC14.39□□□□□ -0.11
PRAMEF2O60811 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF2O60811 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF2O60811 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.39□□□□□ -0.11
PRAMEF2O60811 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF2O60811 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms