Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC28A2O43868 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SLC28A2O43868 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC28A2O43868 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC28A2O43868 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC28A2O43868 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC28A2O43868 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC28A2O43868 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC28A2O43868 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC28A2O43868 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC28A2O43868 AC006058.4-201ENST00000624016 1670 ntBASIC14.83□□□□□ -0.04
SLC28A2O43868 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC28A2O43868 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC28A2O43868 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SLC28A2O43868 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SLC28A2O43868 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC28A2O43868 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SLC28A2O43868 KRT8P37-201ENST00000451609 1420 ntBASIC14.83□□□□□ -0.04
SLC28A2O43868 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.82□□□□□ -0.04
SLC28A2O43868 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC28A2O43868 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
SLC28A2O43868 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SLC28A2O43868 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
SLC28A2O43868 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC28A2O43868 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SLC28A2O43868 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.82□□□□□ -0.04
SLC28A2O43868 MIR663B-201ENST00000408361 115 ntBASIC14.82□□□□□ -0.04
SLC28A2O43868 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.82□□□□□ -0.04
SLC28A2O43868 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.82□□□□□ -0.04
SLC28A2O43868 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.82□□□□□ -0.04
SLC28A2O43868 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.82□□□□□ -0.04
SLC28A2O43868 KRT8P13-201ENST00000463294 1010 ntBASIC14.82□□□□□ -0.04
SLC28A2O43868 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC28A2O43868 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.82□□□□□ -0.04
SLC28A2O43868 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC14.82□□□□□ -0.04
SLC28A2O43868 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC28A2O43868 AC079328.1-201ENST00000560358 952 ntBASIC14.82□□□□□ -0.04
SLC28A2O43868 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.82□□□□□ -0.04
SLC28A2O43868 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.82□□□□□ -0.04
SLC28A2O43868 AL022328.1-201ENST00000610050 478 ntBASIC14.82□□□□□ -0.04
SLC28A2O43868 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.82□□□□□ -0.04
SLC28A2O43868 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC28A2O43868 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC28A2O43868 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC28A2O43868 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SLC28A2O43868 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC28A2O43868 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 AC009090.5-201ENST00000624886 2285 ntBASIC14.82□□□□□ -0.04
SLC28A2O43868 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SLC28A2O43868 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC28A2O43868 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC28A2O43868 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC28A2O43868 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC28A2O43868 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SLC28A2O43868 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A2O43868 AL136379.1-201ENST00000623471 2642 ntBASIC14.81□□□□□ -0.04
SLC28A2O43868 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A2O43868 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A2O43868 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC28A2O43868 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A2O43868 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A2O43868 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A2O43868 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A2O43868 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A2O43868 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC28A2O43868 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SLC28A2O43868 MPRIPP1-201ENST00000452433 1089 ntBASIC14.81□□□□□ -0.04
SLC28A2O43868 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC28A2O43868 FO681548.1-201ENST00000455617 1132 ntBASIC14.81□□□□□ -0.04
SLC28A2O43868 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC28A2O43868 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC28A2O43868 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A2O43868 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
SLC28A2O43868 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.81□□□□□ -0.04
SLC28A2O43868 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
SLC28A2O43868 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms