Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM56Q9BRZ2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM56Q9BRZ2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM56Q9BRZ2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM56Q9BRZ2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM56Q9BRZ2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM56Q9BRZ2 TEX28P1-201ENST00000613479 1221 ntBASIC15.7■□□□□ 0.1
TRIM56Q9BRZ2 TEX28P2-201ENST00000617764 1221 ntBASIC15.7■□□□□ 0.1
TRIM56Q9BRZ2 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM56Q9BRZ2 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM56Q9BRZ2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM56Q9BRZ2 CICP14-201ENST00000629111 2732 ntBASIC15.7■□□□□ 0.1
TRIM56Q9BRZ2 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM56Q9BRZ2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM56Q9BRZ2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM56Q9BRZ2 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM56Q9BRZ2 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM56Q9BRZ2 AC117489.1-201ENST00000625169 3217 ntBASIC15.7■□□□□ 0.1
TRIM56Q9BRZ2 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRIM56Q9BRZ2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM56Q9BRZ2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRIM56Q9BRZ2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 AC138969.2-201ENST00000532739 9932 ntBASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 TSEN15P1-201ENST00000423257 515 ntBASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 RPL13P2-201ENST00000440687 659 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms