Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
VRK1Q99986 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
VRK1Q99986 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
VRK1Q99986 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.63□□□□□ -0.23
VRK1Q99986 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.63□□□□□ -0.23
VRK1Q99986 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.63□□□□□ -0.23
VRK1Q99986 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 AP003680.1-201ENST00000598970 3660 ntBASIC13.63□□□□□ -0.23
VRK1Q99986 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.63□□□□□ -0.23
VRK1Q99986 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.63□□□□□ -0.23
VRK1Q99986 DFFBP1-201ENST00000433250 979 ntBASIC13.63□□□□□ -0.23
VRK1Q99986 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.63□□□□□ -0.23
VRK1Q99986 KRT17P7-201ENST00000451704 1104 ntBASIC13.63□□□□□ -0.23
VRK1Q99986 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.63□□□□□ -0.23
VRK1Q99986 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.63□□□□□ -0.23
VRK1Q99986 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.63□□□□□ -0.23
VRK1Q99986 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
VRK1Q99986 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.63□□□□□ -0.23
VRK1Q99986 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.63□□□□□ -0.23
VRK1Q99986 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.63□□□□□ -0.23
VRK1Q99986 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.63□□□□□ -0.23
VRK1Q99986 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.63□□□□□ -0.23
VRK1Q99986 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.63□□□□□ -0.23
VRK1Q99986 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.63□□□□□ -0.23
VRK1Q99986 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
VRK1Q99986 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.63□□□□□ -0.23
VRK1Q99986 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
VRK1Q99986 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.63□□□□□ -0.23
VRK1Q99986 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
VRK1Q99986 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
VRK1Q99986 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.63□□□□□ -0.23
VRK1Q99986 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.63□□□□□ -0.23
VRK1Q99986 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
VRK1Q99986 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.63□□□□□ -0.23
VRK1Q99986 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.62□□□□□ -0.23
VRK1Q99986 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
VRK1Q99986 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
VRK1Q99986 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
VRK1Q99986 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
VRK1Q99986 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK1Q99986 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
VRK1Q99986 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK1Q99986 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
VRK1Q99986 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.62□□□□□ -0.23
VRK1Q99986 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.62□□□□□ -0.23
VRK1Q99986 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK1Q99986 AC004987.2-201ENST00000395959 1148 ntBASIC13.62□□□□□ -0.23
VRK1Q99986 FO393414.2-201ENST00000405153 598 ntBASIC13.62□□□□□ -0.23
VRK1Q99986 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK1Q99986 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.62□□□□□ -0.23
VRK1Q99986 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.62□□□□□ -0.23
VRK1Q99986 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK1Q99986 AC114501.2-201ENST00000439631 535 ntBASIC13.62□□□□□ -0.23
VRK1Q99986 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK1Q99986 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 AC093004.1-201ENST00000508850 424 ntBASIC13.62□□□□□ -0.23
VRK1Q99986 SPDYE18-201ENST00000510091 1050 ntBASIC13.62□□□□□ -0.23
VRK1Q99986 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.62□□□□□ -0.23
VRK1Q99986 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK1Q99986 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK1Q99986 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
VRK1Q99986 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.62□□□□□ -0.23
VRK1Q99986 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.62□□□□□ -0.23
VRK1Q99986 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK1Q99986 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
VRK1Q99986 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK1Q99986 AL596325.1-201ENST00000563991 1082 ntBASIC13.62□□□□□ -0.23
VRK1Q99986 TP53TG3HP-202ENST00000569755 579 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms