Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 AP001258.2-201ENST00000529891 490 ntBASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 AC073413.1-201ENST00000603927 732 ntBASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC85AQ96PX6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 AC026434.2-201ENST00000506094 1078 ntBASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 AL139099.5-201ENST00000635274 300 ntBASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CCDC85AQ96PX6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 AC136621.1-201ENST00000624017 2304 ntBASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 ANKRD30BP2-201ENST00000435744 1610 ntBASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms