Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 C18orf15-201ENST00000623680 2534 ntBASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ATP6V0A1Q93050 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP6V0A1Q93050 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
ATP6V0A1Q93050 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ATP6V0A1Q93050 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ATP6V0A1Q93050 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.08■□□□□ 0.33
ATP6V0A1Q93050 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP6V0A1Q93050 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP6V0A1Q93050 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 MIR1247-201ENST00000408206 136 ntBASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 MIR3615-201ENST00000581999 87 ntBASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 AC112693.3-201ENST00000624819 1983 ntBASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0A1Q93050 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 AC012508.2-201ENST00000567613 1472 ntBASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 GPAA1P2-201ENST00000417923 928 ntBASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 GOLGA2P4-201ENST00000441462 777 ntBASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 Z93015.1-201ENST00000451718 390 ntBASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 AC022616.1-201ENST00000518688 554 ntBASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 MIR4741-201ENST00000579822 90 ntBASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 AL118558.3-201ENST00000607414 1079 ntBASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 AL603764.1-201ENST00000636452 321 ntBASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 FLJ16779-201ENST00000612722 7638 ntBASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A1Q93050 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms