Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 BTNL10-201ENST00000595971 695 ntBASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 AL049840.4-201ENST00000602422 811 ntBASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 RPSAP52-203ENST00000622976 1023 ntBASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 AC018892.3-201ENST00000623986 2499 ntBASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDND2Q8NHS1 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLDND2Q8NHS1 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
CLDND2Q8NHS1 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLDND2Q8NHS1 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CLDND2Q8NHS1 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLDND2Q8NHS1 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.08□□□□□ -0.31
CLDND2Q8NHS1 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.08□□□□□ -0.31
CLDND2Q8NHS1 LINC01101-201ENST00000622953 1884 ntBASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 AC126755.1-201ENST00000525846 6405 ntBASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 SOCS2P1-201ENST00000417727 557 ntBASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 KRT43P-201ENST00000434019 910 ntBASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 CROCCP4-201ENST00000457096 498 ntBASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 TDH-203ENST00000531764 1110 ntBASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 MIR5189-201ENST00000577370 114 ntBASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 AC233724.13-201ENST00000598383 410 ntBASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDND2Q8NHS1 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
CLDND2Q8NHS1 BOLA2P3-201ENST00000404566 256 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms