Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 RNU1-114P-201ENST00000365297 166 ntBASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 DUX4L45-201ENST00000566406 1057 ntBASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 AC008687.7-202ENST00000637404 953 ntBASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 TUBB1P2-201ENST00000422712 1306 ntBASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 TUBB1P1-201ENST00000503144 1300 ntBASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 AL139094.1-201ENST00000405549 1188 ntBASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 FAM21FP-201ENST00000426241 1131 ntBASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 AC026954.1-201ENST00000429771 1293 ntBASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 AL365203.3-201ENST00000609742 2057 ntBASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms