Protein–RNA interactions for Protein: Q04692

Smarcad1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1, mousemouse

Predictions only

Length 1,021 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcad1Q04692 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcad1Q04692 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.09□□□□□ -0.31
Smarcad1Q04692 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.09□□□□□ -0.31
Smarcad1Q04692 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Gm13392-201ENSMUST00000117708 150 ntBASIC13.09□□□□□ -0.31
Smarcad1Q04692 Gm12058-201ENSMUST00000118614 437 ntBASIC13.09□□□□□ -0.31
Smarcad1Q04692 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Gm6007-201ENSMUST00000208170 823 ntBASIC13.09□□□□□ -0.31
Smarcad1Q04692 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.09□□□□□ -0.31
Smarcad1Q04692 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.09□□□□□ -0.31
Smarcad1Q04692 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcad1Q04692 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Smarcad1Q04692 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Smarcad1Q04692 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Smarcad1Q04692 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Smarcad1Q04692 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Smarcad1Q04692 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.08□□□□□ -0.31
Smarcad1Q04692 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Smarcad1Q04692 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.08□□□□□ -0.32
Smarcad1Q04692 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.08□□□□□ -0.32
Smarcad1Q04692 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.08□□□□□ -0.32
Smarcad1Q04692 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Gm23119-201ENSMUST00000158610 140 ntBASIC13.08□□□□□ -0.32
Smarcad1Q04692 Gm17420-201ENSMUST00000164753 153 ntBASIC13.08□□□□□ -0.32
Smarcad1Q04692 Mospd4-201ENSMUST00000180618 576 ntBASIC13.08□□□□□ -0.32
Smarcad1Q04692 Gm27390-201ENSMUST00000184516 176 ntBASIC13.08□□□□□ -0.32
Smarcad1Q04692 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcad1Q04692 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.07□□□□□ -0.32
Smarcad1Q04692 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcad1Q04692 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Smarcad1Q04692 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms