Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CLTAP09496 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLTAP09496 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLTAP09496 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 AC112693.3-201ENST00000624819 1983 ntBASIC16.79■□□□□ 0.28
CLTAP09496 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLTAP09496 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.79■□□□□ 0.28
CLTAP09496 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.79■□□□□ 0.28
CLTAP09496 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CLTAP09496 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
CLTAP09496 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.79■□□□□ 0.28
CLTAP09496 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.79■□□□□ 0.28
CLTAP09496 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CLTAP09496 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.79■□□□□ 0.28
CLTAP09496 MIR5189-201ENST00000577370 114 ntBASIC16.79■□□□□ 0.28
CLTAP09496 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.79■□□□□ 0.28
CLTAP09496 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CLTAP09496 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.79■□□□□ 0.28
CLTAP09496 AL161772.1-201ENST00000610494 4412 ntBASIC16.79■□□□□ 0.28
CLTAP09496 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.79■□□□□ 0.28
CLTAP09496 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLTAP09496 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CLTAP09496 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CLTAP09496 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.79■□□□□ 0.28
CLTAP09496 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CLTAP09496 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.79■□□□□ 0.28
CLTAP09496 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
CLTAP09496 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.79■□□□□ 0.28
CLTAP09496 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.78■□□□□ 0.28
CLTAP09496 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.78■□□□□ 0.28
CLTAP09496 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.78■□□□□ 0.28
CLTAP09496 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.78■□□□□ 0.28
CLTAP09496 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.78■□□□□ 0.28
CLTAP09496 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CLTAP09496 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CLTAP09496 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CLTAP09496 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.78■□□□□ 0.28
CLTAP09496 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.78■□□□□ 0.28
CLTAP09496 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 ACKR1-201ENST00000368121 1240 ntBASIC16.78■□□□□ 0.28
CLTAP09496 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.78■□□□□ 0.28
CLTAP09496 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.78■□□□□ 0.28
CLTAP09496 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CLTAP09496 TDH-203ENST00000531764 1110 ntBASIC16.78■□□□□ 0.28
CLTAP09496 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.78■□□□□ 0.28
CLTAP09496 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.78■□□□□ 0.28
CLTAP09496 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CLTAP09496 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.78■□□□□ 0.28
CLTAP09496 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.78■□□□□ 0.28
CLTAP09496 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.78■□□□□ 0.28
CLTAP09496 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.78■□□□□ 0.28
CLTAP09496 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.78■□□□□ 0.28
CLTAP09496 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.78■□□□□ 0.28
CLTAP09496 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLTAP09496 C18orf15-201ENST00000623680 2534 ntBASIC16.77■□□□□ 0.28
CLTAP09496 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLTAP09496 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLTAP09496 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.77■□□□□ 0.28
CLTAP09496 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLTAP09496 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms