Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RC3H2Q9HBD1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RC3H2Q9HBD1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
RC3H2Q9HBD1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.96■■□□□ 1.59
RC3H2Q9HBD1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
RC3H2Q9HBD1 AC091305.1-201ENST00000479476 895 ntBASIC24.95■■□□□ 1.58
RC3H2Q9HBD1 MIR4767-201ENST00000582827 78 ntBASIC24.95■■□□□ 1.58
RC3H2Q9HBD1 AC131274.2-201ENST00000580697 1507 ntBASIC24.95■■□□□ 1.58
RC3H2Q9HBD1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
RC3H2Q9HBD1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RC3H2Q9HBD1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.94■■□□□ 1.58
RC3H2Q9HBD1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
RC3H2Q9HBD1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.94■■□□□ 1.58
RC3H2Q9HBD1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RC3H2Q9HBD1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.94■■□□□ 1.58
RC3H2Q9HBD1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.94■■□□□ 1.58
RC3H2Q9HBD1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RC3H2Q9HBD1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.94■■□□□ 1.58
RC3H2Q9HBD1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
RC3H2Q9HBD1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
RC3H2Q9HBD1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
RC3H2Q9HBD1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RC3H2Q9HBD1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RC3H2Q9HBD1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.93■■□□□ 1.58
RC3H2Q9HBD1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.93■■□□□ 1.58
RC3H2Q9HBD1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.93■■□□□ 1.58
RC3H2Q9HBD1 MIR6821-201ENST00000617625 74 ntBASIC24.93■■□□□ 1.58
RC3H2Q9HBD1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RC3H2Q9HBD1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.93■■□□□ 1.58
RC3H2Q9HBD1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
RC3H2Q9HBD1 SYT6-210ENST00000641643 1587 ntBASIC24.93■■□□□ 1.58
RC3H2Q9HBD1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
RC3H2Q9HBD1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RC3H2Q9HBD1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.92■■□□□ 1.58
RC3H2Q9HBD1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RC3H2Q9HBD1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RC3H2Q9HBD1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.92■■□□□ 1.58
RC3H2Q9HBD1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RC3H2Q9HBD1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
RC3H2Q9HBD1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.91■■□□□ 1.58
RC3H2Q9HBD1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.91■■□□□ 1.58
RC3H2Q9HBD1 SERBP1P1-201ENST00000396021 1160 ntBASIC24.91■■□□□ 1.58
RC3H2Q9HBD1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RC3H2Q9HBD1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RC3H2Q9HBD1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
RC3H2Q9HBD1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RC3H2Q9HBD1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
RC3H2Q9HBD1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.9■■□□□ 1.58
RC3H2Q9HBD1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
RC3H2Q9HBD1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.9■■□□□ 1.58
RC3H2Q9HBD1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.9■■□□□ 1.58
RC3H2Q9HBD1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RC3H2Q9HBD1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RC3H2Q9HBD1 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.9■■□□□ 1.58
RC3H2Q9HBD1 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.9■■□□□ 1.58
RC3H2Q9HBD1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
RC3H2Q9HBD1 AC097381.1-201ENST00000429019 1296 ntBASIC24.89■■□□□ 1.58
RC3H2Q9HBD1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RC3H2Q9HBD1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.89■■□□□ 1.58
RC3H2Q9HBD1 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.89■■□□□ 1.58
RC3H2Q9HBD1 AC092171.4-201ENST00000609130 632 ntBASIC24.89■■□□□ 1.58
RC3H2Q9HBD1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.89■■□□□ 1.57
RC3H2Q9HBD1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.89■■□□□ 1.57
RC3H2Q9HBD1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RC3H2Q9HBD1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RC3H2Q9HBD1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.88■■□□□ 1.57
RC3H2Q9HBD1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
RC3H2Q9HBD1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
RC3H2Q9HBD1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RC3H2Q9HBD1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RC3H2Q9HBD1 CA15P2-201ENST00000611168 834 ntBASIC24.88■■□□□ 1.57
RC3H2Q9HBD1 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.88■■□□□ 1.57
RC3H2Q9HBD1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24.87■■□□□ 1.57
RC3H2Q9HBD1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.87■■□□□ 1.57
RC3H2Q9HBD1 RASA4CP-201ENST00000424092 1398 ntBASIC24.87■■□□□ 1.57
RC3H2Q9HBD1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RC3H2Q9HBD1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RC3H2Q9HBD1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
RC3H2Q9HBD1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RC3H2Q9HBD1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
RC3H2Q9HBD1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RC3H2Q9HBD1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RC3H2Q9HBD1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.86■■□□□ 1.57
RC3H2Q9HBD1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RC3H2Q9HBD1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
RC3H2Q9HBD1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RC3H2Q9HBD1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.85■■□□□ 1.57
RC3H2Q9HBD1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
RC3H2Q9HBD1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RC3H2Q9HBD1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.85■■□□□ 1.57
RC3H2Q9HBD1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.85■■□□□ 1.57
RC3H2Q9HBD1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RC3H2Q9HBD1 AC011298.3-201ENST00000615796 283 ntBASIC24.85■■□□□ 1.57
RC3H2Q9HBD1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.85■■□□□ 1.57
RC3H2Q9HBD1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RC3H2Q9HBD1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.84■■□□□ 1.57
RC3H2Q9HBD1 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.84■■□□□ 1.57
RC3H2Q9HBD1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.84■■□□□ 1.57
RC3H2Q9HBD1 AL138724.1-201ENST00000606771 1088 ntBASIC24.84■■□□□ 1.57
RC3H2Q9HBD1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.84■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms