Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp1b1Q99LU0 Notumos-201ENSMUST00000151998 2659 ntBASIC19.51■□□□□ 0.71
Chmp1b1Q99LU0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp1b1Q99LU0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp1b1Q99LU0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Chmp1b1Q99LU0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp1b1Q99LU0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp1b1Q99LU0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.51■□□□□ 0.71
Chmp1b1Q99LU0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.51■□□□□ 0.71
Chmp1b1Q99LU0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp1b1Q99LU0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.51■□□□□ 0.71
Chmp1b1Q99LU0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Chmp1b1Q99LU0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp1b1Q99LU0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp1b1Q99LU0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp1b1Q99LU0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp1b1Q99LU0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp1b1Q99LU0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp1b1Q99LU0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp1b1Q99LU0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.5■□□□□ 0.71
Chmp1b1Q99LU0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp1b1Q99LU0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp1b1Q99LU0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp1b1Q99LU0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp1b1Q99LU0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp1b1Q99LU0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp1b1Q99LU0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp1b1Q99LU0 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.49■□□□□ 0.71
Chmp1b1Q99LU0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.49■□□□□ 0.71
Chmp1b1Q99LU0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Chmp1b1Q99LU0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp1b1Q99LU0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp1b1Q99LU0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Chmp1b1Q99LU0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp1b1Q99LU0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp1b1Q99LU0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp1b1Q99LU0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp1b1Q99LU0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp1b1Q99LU0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp1b1Q99LU0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.48■□□□□ 0.71
Chmp1b1Q99LU0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Chmp1b1Q99LU0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp1b1Q99LU0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp1b1Q99LU0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp1b1Q99LU0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp1b1Q99LU0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.47■□□□□ 0.71
Chmp1b1Q99LU0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp1b1Q99LU0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp1b1Q99LU0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp1b1Q99LU0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.47■□□□□ 0.71
Chmp1b1Q99LU0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp1b1Q99LU0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Chmp1b1Q99LU0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp1b1Q99LU0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp1b1Q99LU0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp1b1Q99LU0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp1b1Q99LU0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Chmp1b1Q99LU0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp1b1Q99LU0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp1b1Q99LU0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp1b1Q99LU0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp1b1Q99LU0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp1b1Q99LU0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp1b1Q99LU0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp1b1Q99LU0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
Chmp1b1Q99LU0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp1b1Q99LU0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp1b1Q99LU0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp1b1Q99LU0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp1b1Q99LU0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp1b1Q99LU0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp1b1Q99LU0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Chmp1b1Q99LU0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp1b1Q99LU0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp1b1Q99LU0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.43■□□□□ 0.7
Chmp1b1Q99LU0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp1b1Q99LU0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Chmp1b1Q99LU0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp1b1Q99LU0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp1b1Q99LU0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp1b1Q99LU0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp1b1Q99LU0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.42■□□□□ 0.7
Chmp1b1Q99LU0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Chmp1b1Q99LU0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp1b1Q99LU0 Gm43566-201ENSMUST00000196851 808 ntBASIC19.42■□□□□ 0.7
Chmp1b1Q99LU0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.42■□□□□ 0.7
Chmp1b1Q99LU0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp1b1Q99LU0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Chmp1b1Q99LU0 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.41■□□□□ 0.7
Chmp1b1Q99LU0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp1b1Q99LU0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp1b1Q99LU0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp1b1Q99LU0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp1b1Q99LU0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp1b1Q99LU0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp1b1Q99LU0 Gm13238-201ENSMUST00000117655 780 ntBASIC19.41■□□□□ 0.7
Chmp1b1Q99LU0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Chmp1b1Q99LU0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp1b1Q99LU0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp1b1Q99LU0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 123.8 ms