Protein–RNA interactions for Protein: Q8VE37

Rcc1, Regulator of chromosome condensation, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcc1Q8VE37 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rcc1Q8VE37 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.88■□□□□ 0.45
Rcc1Q8VE37 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rcc1Q8VE37 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rcc1Q8VE37 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rcc1Q8VE37 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Rcc1Q8VE37 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Rcc1Q8VE37 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rcc1Q8VE37 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rcc1Q8VE37 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rcc1Q8VE37 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rcc1Q8VE37 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rcc1Q8VE37 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rcc1Q8VE37 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rcc1Q8VE37 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rcc1Q8VE37 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rcc1Q8VE37 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rcc1Q8VE37 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rcc1Q8VE37 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rcc1Q8VE37 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rcc1Q8VE37 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rcc1Q8VE37 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rcc1Q8VE37 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.86■□□□□ 0.45
Rcc1Q8VE37 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.86■□□□□ 0.45
Rcc1Q8VE37 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Rcc1Q8VE37 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rcc1Q8VE37 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Rcc1Q8VE37 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Rcc1Q8VE37 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Rcc1Q8VE37 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.85■□□□□ 0.45
Rcc1Q8VE37 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rcc1Q8VE37 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rcc1Q8VE37 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rcc1Q8VE37 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rcc1Q8VE37 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rcc1Q8VE37 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rcc1Q8VE37 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rcc1Q8VE37 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rcc1Q8VE37 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rcc1Q8VE37 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.84■□□□□ 0.45
Rcc1Q8VE37 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rcc1Q8VE37 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rcc1Q8VE37 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rcc1Q8VE37 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rcc1Q8VE37 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rcc1Q8VE37 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rcc1Q8VE37 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.84■□□□□ 0.45
Rcc1Q8VE37 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.84■□□□□ 0.45
Rcc1Q8VE37 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rcc1Q8VE37 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rcc1Q8VE37 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rcc1Q8VE37 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rcc1Q8VE37 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rcc1Q8VE37 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Rcc1Q8VE37 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Rcc1Q8VE37 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.83■□□□□ 0.44
Rcc1Q8VE37 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rcc1Q8VE37 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.83■□□□□ 0.44
Rcc1Q8VE37 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rcc1Q8VE37 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rcc1Q8VE37 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rcc1Q8VE37 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.82■□□□□ 0.44
Rcc1Q8VE37 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rcc1Q8VE37 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.82■□□□□ 0.44
Rcc1Q8VE37 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rcc1Q8VE37 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rcc1Q8VE37 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rcc1Q8VE37 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rcc1Q8VE37 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rcc1Q8VE37 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rcc1Q8VE37 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rcc1Q8VE37 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rcc1Q8VE37 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rcc1Q8VE37 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rcc1Q8VE37 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.81■□□□□ 0.44
Rcc1Q8VE37 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
Rcc1Q8VE37 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rcc1Q8VE37 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rcc1Q8VE37 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rcc1Q8VE37 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Rcc1Q8VE37 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rcc1Q8VE37 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rcc1Q8VE37 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rcc1Q8VE37 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.8■□□□□ 0.44
Rcc1Q8VE37 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rcc1Q8VE37 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rcc1Q8VE37 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rcc1Q8VE37 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.79■□□□□ 0.44
Rcc1Q8VE37 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rcc1Q8VE37 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.79■□□□□ 0.44
Rcc1Q8VE37 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rcc1Q8VE37 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rcc1Q8VE37 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.78■□□□□ 0.44
Rcc1Q8VE37 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rcc1Q8VE37 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rcc1Q8VE37 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rcc1Q8VE37 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rcc1Q8VE37 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rcc1Q8VE37 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rcc1Q8VE37 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms