Protein–RNA interactions for Protein: Q8NC42

RNF149, E3 ubiquitin-protein ligase RNF149, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149Q8NC42 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF149Q8NC42 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.47■■□□□ 1.67
RNF149Q8NC42 AC004448.1-201ENST00000458332 883 ntBASIC25.47■■□□□ 1.67
RNF149Q8NC42 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.47■■□□□ 1.67
RNF149Q8NC42 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.47■■□□□ 1.67
RNF149Q8NC42 AL117332.1-201ENST00000622628 974 ntBASIC25.47■■□□□ 1.67
RNF149Q8NC42 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF149Q8NC42 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF149Q8NC42 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF149Q8NC42 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RNF149Q8NC42 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.46■■□□□ 1.67
RNF149Q8NC42 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF149Q8NC42 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RNF149Q8NC42 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF149Q8NC42 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.46■■□□□ 1.67
RNF149Q8NC42 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.46■■□□□ 1.67
RNF149Q8NC42 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF149Q8NC42 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF149Q8NC42 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
RNF149Q8NC42 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
RNF149Q8NC42 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RNF149Q8NC42 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RNF149Q8NC42 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.45■■□□□ 1.66
RNF149Q8NC42 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RNF149Q8NC42 AC131274.2-201ENST00000580697 1507 ntBASIC25.45■■□□□ 1.66
RNF149Q8NC42 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RNF149Q8NC42 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.44■■□□□ 1.66
RNF149Q8NC42 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.44■■□□□ 1.66
RNF149Q8NC42 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF149Q8NC42 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.44■■□□□ 1.66
RNF149Q8NC42 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.44■■□□□ 1.66
RNF149Q8NC42 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.44■■□□□ 1.66
RNF149Q8NC42 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.44■■□□□ 1.66
RNF149Q8NC42 MIR3621-201ENST00000580529 85 ntBASIC25.44■■□□□ 1.66
RNF149Q8NC42 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RNF149Q8NC42 AC008406.3-201ENST00000620001 1374 ntBASIC25.44■■□□□ 1.66
RNF149Q8NC42 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RNF149Q8NC42 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RNF149Q8NC42 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RNF149Q8NC42 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.43■■□□□ 1.66
RNF149Q8NC42 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.43■■□□□ 1.66
RNF149Q8NC42 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.43■■□□□ 1.66
RNF149Q8NC42 HLA-L-211ENST00000482052 1765 ntBASIC25.43■■□□□ 1.66
RNF149Q8NC42 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.43■■□□□ 1.66
RNF149Q8NC42 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.43■■□□□ 1.66
RNF149Q8NC42 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.43■■□□□ 1.66
RNF149Q8NC42 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RNF149Q8NC42 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNF149Q8NC42 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNF149Q8NC42 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.42■■□□□ 1.66
RNF149Q8NC42 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNF149Q8NC42 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.42■■□□□ 1.66
RNF149Q8NC42 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.42■■□□□ 1.66
RNF149Q8NC42 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.42■■□□□ 1.66
RNF149Q8NC42 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.42■■□□□ 1.66
RNF149Q8NC42 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNF149Q8NC42 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
RNF149Q8NC42 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNF149Q8NC42 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNF149Q8NC42 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RNF149Q8NC42 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.41■■□□□ 1.66
RNF149Q8NC42 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
RNF149Q8NC42 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
RNF149Q8NC42 AC020928.2-201ENST00000588717 2197 ntBASIC25.41■■□□□ 1.66
RNF149Q8NC42 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RNF149Q8NC42 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.41■■□□□ 1.66
RNF149Q8NC42 AL356740.2-201ENST00000601559 647 ntBASIC25.41■■□□□ 1.66
RNF149Q8NC42 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.41■■□□□ 1.66
RNF149Q8NC42 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
RNF149Q8NC42 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
RNF149Q8NC42 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RNF149Q8NC42 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.4■■□□□ 1.66
RNF149Q8NC42 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RNF149Q8NC42 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RNF149Q8NC42 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RNF149Q8NC42 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.4■■□□□ 1.66
RNF149Q8NC42 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.4■■□□□ 1.66
RNF149Q8NC42 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RNF149Q8NC42 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.39■■□□□ 1.66
RNF149Q8NC42 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
RNF149Q8NC42 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RNF149Q8NC42 AL022069.1-201ENST00000568025 1636 ntBASIC25.38■■□□□ 1.65
RNF149Q8NC42 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF149Q8NC42 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.38■■□□□ 1.65
RNF149Q8NC42 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.38■■□□□ 1.65
RNF149Q8NC42 AC131281.2-201ENST00000520478 145 ntBASIC25.38■■□□□ 1.65
RNF149Q8NC42 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RNF149Q8NC42 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
RNF149Q8NC42 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.38■■□□□ 1.65
RNF149Q8NC42 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF149Q8NC42 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
RNF149Q8NC42 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.37■■□□□ 1.65
RNF149Q8NC42 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.37■■□□□ 1.65
RNF149Q8NC42 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RNF149Q8NC42 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RNF149Q8NC42 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.37■■□□□ 1.65
RNF149Q8NC42 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RNF149Q8NC42 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
RNF149Q8NC42 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RNF149Q8NC42 AP003733.4-201ENST00000623785 1697 ntBASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms