Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL27A1Q8IZC6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL27A1Q8IZC6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL27A1Q8IZC6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
COL27A1Q8IZC6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
COL27A1Q8IZC6 SRD5A1P1-201ENST00000442297 786 ntBASIC22.14■■□□□ 1.13
COL27A1Q8IZC6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.14■■□□□ 1.13
COL27A1Q8IZC6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
COL27A1Q8IZC6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
COL27A1Q8IZC6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL27A1Q8IZC6 AL355001.2-201ENST00000620617 1191 ntBASIC22.13■■□□□ 1.13
COL27A1Q8IZC6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL27A1Q8IZC6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.13■■□□□ 1.13
COL27A1Q8IZC6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
COL27A1Q8IZC6 AC005703.6-201ENST00000623265 1329 ntBASIC22.13■■□□□ 1.13
COL27A1Q8IZC6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.13■■□□□ 1.13
COL27A1Q8IZC6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL27A1Q8IZC6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL27A1Q8IZC6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL27A1Q8IZC6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.13■■□□□ 1.13
COL27A1Q8IZC6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
COL27A1Q8IZC6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL27A1Q8IZC6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL27A1Q8IZC6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL27A1Q8IZC6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL27A1Q8IZC6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL27A1Q8IZC6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
COL27A1Q8IZC6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL27A1Q8IZC6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL27A1Q8IZC6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.12■■□□□ 1.13
COL27A1Q8IZC6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
COL27A1Q8IZC6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
COL27A1Q8IZC6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL27A1Q8IZC6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.11■■□□□ 1.13
COL27A1Q8IZC6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL27A1Q8IZC6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COL27A1Q8IZC6 DUX4L19-201ENST00000557448 1267 ntBASIC22.11■■□□□ 1.13
COL27A1Q8IZC6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.11■■□□□ 1.13
COL27A1Q8IZC6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL27A1Q8IZC6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL27A1Q8IZC6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL27A1Q8IZC6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.1■■□□□ 1.13
COL27A1Q8IZC6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL27A1Q8IZC6 SERBP1P1-201ENST00000396021 1160 ntBASIC22.09■■□□□ 1.13
COL27A1Q8IZC6 MIR4767-201ENST00000582827 78 ntBASIC22.09■■□□□ 1.13
COL27A1Q8IZC6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
COL27A1Q8IZC6 AC092803.2-201ENST00000564287 1899 ntBASIC22.09■■□□□ 1.13
COL27A1Q8IZC6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL27A1Q8IZC6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COL27A1Q8IZC6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
COL27A1Q8IZC6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.09■■□□□ 1.13
COL27A1Q8IZC6 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.09■■□□□ 1.13
COL27A1Q8IZC6 MIR6089-201ENST00000616698 64 ntBASIC22.09■■□□□ 1.13
COL27A1Q8IZC6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL27A1Q8IZC6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
COL27A1Q8IZC6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
COL27A1Q8IZC6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.08■■□□□ 1.13
COL27A1Q8IZC6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.07■■□□□ 1.12
COL27A1Q8IZC6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL27A1Q8IZC6 MIR5787-201ENST00000611784 55 ntBASIC22.07■■□□□ 1.12
COL27A1Q8IZC6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL27A1Q8IZC6 C17orf82-201ENST00000623772 1530 ntBASIC22.07■■□□□ 1.12
COL27A1Q8IZC6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL27A1Q8IZC6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.07■■□□□ 1.12
COL27A1Q8IZC6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.07■■□□□ 1.12
COL27A1Q8IZC6 AC092666.2-201ENST00000613287 246 ntBASIC22.07■■□□□ 1.12
COL27A1Q8IZC6 AC011298.3-201ENST00000615796 283 ntBASIC22.07■■□□□ 1.12
COL27A1Q8IZC6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.06■■□□□ 1.12
COL27A1Q8IZC6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
COL27A1Q8IZC6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL27A1Q8IZC6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL27A1Q8IZC6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL27A1Q8IZC6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
COL27A1Q8IZC6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL27A1Q8IZC6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.06■■□□□ 1.12
COL27A1Q8IZC6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.06■■□□□ 1.12
COL27A1Q8IZC6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL27A1Q8IZC6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.05■■□□□ 1.12
COL27A1Q8IZC6 AC097381.1-201ENST00000429019 1296 ntBASIC22.05■■□□□ 1.12
COL27A1Q8IZC6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.05■■□□□ 1.12
COL27A1Q8IZC6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.05■■□□□ 1.12
COL27A1Q8IZC6 MIR6821-201ENST00000617625 74 ntBASIC22.05■■□□□ 1.12
COL27A1Q8IZC6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL27A1Q8IZC6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL27A1Q8IZC6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
COL27A1Q8IZC6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL27A1Q8IZC6 AC087623.3-201ENST00000607047 1098 ntBASIC22.05■■□□□ 1.12
COL27A1Q8IZC6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
COL27A1Q8IZC6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.04■■□□□ 1.12
COL27A1Q8IZC6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL27A1Q8IZC6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL27A1Q8IZC6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
COL27A1Q8IZC6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL27A1Q8IZC6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL27A1Q8IZC6 CA15P2-201ENST00000611168 834 ntBASIC22.04■■□□□ 1.12
COL27A1Q8IZC6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL27A1Q8IZC6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL27A1Q8IZC6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
COL27A1Q8IZC6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.04■■□□□ 1.12
COL27A1Q8IZC6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms