Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RSPO4Q2I0M5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
RSPO4Q2I0M5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.69■■□□□ 1.22
RSPO4Q2I0M5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.69■■□□□ 1.22
RSPO4Q2I0M5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RSPO4Q2I0M5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RSPO4Q2I0M5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RSPO4Q2I0M5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RSPO4Q2I0M5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.69■■□□□ 1.22
RSPO4Q2I0M5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.69■■□□□ 1.22
RSPO4Q2I0M5 AC066615.1-201ENST00000640911 628 ntBASIC22.69■■□□□ 1.22
RSPO4Q2I0M5 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RSPO4Q2I0M5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.68■■□□□ 1.22
RSPO4Q2I0M5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RSPO4Q2I0M5 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.68■■□□□ 1.22
RSPO4Q2I0M5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
RSPO4Q2I0M5 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.68■■□□□ 1.22
RSPO4Q2I0M5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.68■■□□□ 1.22
RSPO4Q2I0M5 AC245100.8-202ENST00000629247 1058 ntBASIC22.68■■□□□ 1.22
RSPO4Q2I0M5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RSPO4Q2I0M5 AC005703.6-201ENST00000623265 1329 ntBASIC22.67■■□□□ 1.22
RSPO4Q2I0M5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
RSPO4Q2I0M5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.67■■□□□ 1.22
RSPO4Q2I0M5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.67■■□□□ 1.22
RSPO4Q2I0M5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.67■■□□□ 1.22
RSPO4Q2I0M5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.67■■□□□ 1.22
RSPO4Q2I0M5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.67■■□□□ 1.22
RSPO4Q2I0M5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RSPO4Q2I0M5 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RSPO4Q2I0M5 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RSPO4Q2I0M5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RSPO4Q2I0M5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RSPO4Q2I0M5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.66■■□□□ 1.22
RSPO4Q2I0M5 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.66■■□□□ 1.22
RSPO4Q2I0M5 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RSPO4Q2I0M5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RSPO4Q2I0M5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.65■■□□□ 1.22
RSPO4Q2I0M5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RSPO4Q2I0M5 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.65■■□□□ 1.22
RSPO4Q2I0M5 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.65■■□□□ 1.22
RSPO4Q2I0M5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RSPO4Q2I0M5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.65■■□□□ 1.22
RSPO4Q2I0M5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.65■■□□□ 1.22
RSPO4Q2I0M5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
RSPO4Q2I0M5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.64■■□□□ 1.21
RSPO4Q2I0M5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.64■■□□□ 1.21
RSPO4Q2I0M5 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.64■■□□□ 1.21
RSPO4Q2I0M5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.64■■□□□ 1.21
RSPO4Q2I0M5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.64■■□□□ 1.21
RSPO4Q2I0M5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
RSPO4Q2I0M5 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
RSPO4Q2I0M5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RSPO4Q2I0M5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RSPO4Q2I0M5 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.63■■□□□ 1.21
RSPO4Q2I0M5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RSPO4Q2I0M5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RSPO4Q2I0M5 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.63■■□□□ 1.21
RSPO4Q2I0M5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.63■■□□□ 1.21
RSPO4Q2I0M5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.63■■□□□ 1.21
RSPO4Q2I0M5 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RSPO4Q2I0M5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
RSPO4Q2I0M5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.62■■□□□ 1.21
RSPO4Q2I0M5 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RSPO4Q2I0M5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
RSPO4Q2I0M5 BX842568.3-201ENST00000418104 571 ntBASIC22.62■■□□□ 1.21
RSPO4Q2I0M5 NTF6G-201ENST00000591094 616 ntBASIC22.62■■□□□ 1.21
RSPO4Q2I0M5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RSPO4Q2I0M5 AC136469.2-201ENST00000623944 1028 ntBASIC22.62■■□□□ 1.21
RSPO4Q2I0M5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RSPO4Q2I0M5 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RSPO4Q2I0M5 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RSPO4Q2I0M5 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RSPO4Q2I0M5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RSPO4Q2I0M5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RSPO4Q2I0M5 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
RSPO4Q2I0M5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
RSPO4Q2I0M5 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RSPO4Q2I0M5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.61■■□□□ 1.21
RSPO4Q2I0M5 AC123595.1-201ENST00000440769 1046 ntBASIC22.61■■□□□ 1.21
RSPO4Q2I0M5 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.61■■□□□ 1.21
RSPO4Q2I0M5 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
RSPO4Q2I0M5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RSPO4Q2I0M5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.6■■□□□ 1.21
RSPO4Q2I0M5 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RSPO4Q2I0M5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.6■■□□□ 1.21
RSPO4Q2I0M5 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RSPO4Q2I0M5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.6■■□□□ 1.21
RSPO4Q2I0M5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.6■■□□□ 1.21
RSPO4Q2I0M5 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RSPO4Q2I0M5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.6■■□□□ 1.21
RSPO4Q2I0M5 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RSPO4Q2I0M5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.59■■□□□ 1.21
RSPO4Q2I0M5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.59■■□□□ 1.21
RSPO4Q2I0M5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.59■■□□□ 1.21
RSPO4Q2I0M5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
RSPO4Q2I0M5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
RSPO4Q2I0M5 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RSPO4Q2I0M5 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RSPO4Q2I0M5 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RSPO4Q2I0M5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms