Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 RNR3YIL066C 2610 nt5.65□□□□□ -1.5
RFX1P48743 IMA2YOL157C 1770 nt5.65□□□□□ -1.5
RFX1P48743 UGO1YDR470C 1509 nt5.65□□□□□ -1.5
RFX1P48743 SRV2YNL138W 1581 nt5.65□□□□□ -1.5
RFX1P48743 GET3YDL100C 1065 nt5.65□□□□□ -1.5
RFX1P48743 SIP2YGL208W 1248 nt5.65□□□□□ -1.5
RFX1P48743 NCS6YGL211W 1080 nt5.65□□□□□ -1.5
RFX1P48743 FSH1YHR049W 732 nt5.65□□□□□ -1.5
RFX1P48743 SFC1YJR095W 969 nt5.65□□□□□ -1.5
RFX1P48743 YLR169WYLR169W 354 nt5.65□□□□□ -1.5
RFX1P48743 YBL029WYBL029W 1131 nt5.65□□□□□ -1.5
RFX1P48743 CTL1YMR180C 963 nt5.65□□□□□ -1.5
RFX1P48743 IRC14YOR135C 342 nt5.65□□□□□ -1.5
RFX1P48743 RPO26YPR187W 468 nt5.65□□□□□ -1.5
RFX1P48743 CKS1YBR135W 453 nt5.65□□□□□ -1.5
RFX1P48743 STD1YOR047C 1335 nt5.65□□□□□ -1.51
RFX1P48743 SSK1YLR006C 2139 nt5.65□□□□□ -1.51
RFX1P48743 TEL2YGR099W 2067 nt5.64□□□□□ -1.51
RFX1P48743 YCR097W-AYCR097W-A 267 nt5.64□□□□□ -1.51
RFX1P48743 GRX6YDL010W 696 nt5.64□□□□□ -1.51
RFX1P48743 YDR053WYDR053W 396 nt5.64□□□□□ -1.51
RFX1P48743 GIR2YDR152W 798 nt5.64□□□□□ -1.51
RFX1P48743 YDR222WYDR222W 1248 nt5.64□□□□□ -1.51
RFX1P48743 YNG2YHR090C 849 nt5.64□□□□□ -1.51
RFX1P48743 YJL215CYJL215C 360 nt5.64□□□□□ -1.51
RFX1P48743 SPC34YKR037C 888 nt5.64□□□□□ -1.51
RFX1P48743 GEX1YCL073C 1848 nt5.64□□□□□ -1.51
RFX1P48743 GEX2YKR106W 1848 nt5.64□□□□□ -1.51
RFX1P48743 CHL4YDR254W 1377 nt5.64□□□□□ -1.51
RFX1P48743 ACC1YNR016C 6702 nt5.64□□□□□ -1.51
RFX1P48743 PDC1YLR044C 1692 nt5.63□□□□□ -1.51
RFX1P48743 ALT1YLR089C 1779 nt5.63□□□□□ -1.51
RFX1P48743 BAP2YBR068C 1830 nt5.63□□□□□ -1.51
RFX1P48743 YDL034WYDL034W 345 nt5.63□□□□□ -1.51
RFX1P48743 SCL1YGL011C 759 nt5.63□□□□□ -1.51
RFX1P48743 tN(GUU)CtN(GUU)C 74 nt5.63□□□□□ -1.51
RFX1P48743 tN(GUU)FtN(GUU)F 74 nt5.63□□□□□ -1.51
RFX1P48743 tN(GUU)GtN(GUU)G 74 nt5.63□□□□□ -1.51
RFX1P48743 tN(GUU)KtN(GUU)K 74 nt5.63□□□□□ -1.51
RFX1P48743 tN(GUU)LtN(GUU)L 74 nt5.63□□□□□ -1.51
RFX1P48743 tN(GUU)N1tN(GUU)N1 74 nt5.63□□□□□ -1.51
RFX1P48743 tN(GUU)N2tN(GUU)N2 74 nt5.63□□□□□ -1.51
RFX1P48743 tN(GUU)O1tN(GUU)O1 74 nt5.63□□□□□ -1.51
RFX1P48743 tN(GUU)O2tN(GUU)O2 74 nt5.63□□□□□ -1.51
RFX1P48743 tN(GUU)PtN(GUU)P 74 nt5.63□□□□□ -1.51
RFX1P48743 YDC1YPL087W 954 nt5.63□□□□□ -1.51
RFX1P48743 SUB2YDL084W 1341 nt5.63□□□□□ -1.51
RFX1P48743 DXO1YDR370C 1329 nt5.63□□□□□ -1.51
RFX1P48743 EMW1YNL313C 2715 nt5.63□□□□□ -1.51
RFX1P48743 UTP7YER082C 1665 nt5.63□□□□□ -1.51
RFX1P48743 RSC30YHR056C 2652 nt5.62□□□□□ -1.51
RFX1P48743 LAP2YNL045W 2016 nt5.62□□□□□ -1.51
RFX1P48743 PFA5YDR459C 1125 nt5.62□□□□□ -1.51
RFX1P48743 ARD1YHR013C 717 nt5.62□□□□□ -1.51
RFX1P48743 SPO16YHR153C 597 nt5.62□□□□□ -1.51
RFX1P48743 NVJ1YHR195W 966 nt5.62□□□□□ -1.51
RFX1P48743 ERV41YML067C 1059 nt5.62□□□□□ -1.51
RFX1P48743 RUF21RUF21 707 nt5.62□□□□□ -1.51
RFX1P48743 PSH1YOL054W 1221 nt5.62□□□□□ -1.51
RFX1P48743 GPI2YPL076W 843 nt5.62□□□□□ -1.51
RFX1P48743 SIT1YEL065W 1887 nt5.62□□□□□ -1.51
RFX1P48743 ABZ1YNR033W 2364 nt5.62□□□□□ -1.51
RFX1P48743 RMD1YDL001W 1293 nt5.61□□□□□ -1.51
RFX1P48743 ASF2YDL197C 1578 nt5.61□□□□□ -1.51
RFX1P48743 VPS36YLR417W 1701 nt5.61□□□□□ -1.51
RFX1P48743 UBX2YML013W 1755 nt5.61□□□□□ -1.51
RFX1P48743 ASN1YPR145W 1719 nt5.61□□□□□ -1.51
RFX1P48743 RRT2YBR246W 1164 nt5.61□□□□□ -1.51
RFX1P48743 UTP18YJL069C 1785 nt5.6□□□□□ -1.51
RFX1P48743 KAR1YNL188W 1302 nt5.6□□□□□ -1.51
RFX1P48743 CAD1YDR423C 1230 nt5.6□□□□□ -1.51
RFX1P48743 SPO74YGL170C 1242 nt5.6□□□□□ -1.51
RFX1P48743 YGR176WYGR176W 348 nt5.6□□□□□ -1.51
RFX1P48743 COS9YKL219W 1224 nt5.6□□□□□ -1.51
RFX1P48743 MTG1YMR097C 1104 nt5.6□□□□□ -1.51
RFX1P48743 RHO2YNL090W 579 nt5.6□□□□□ -1.51
RFX1P48743 DAL82YNL314W 768 nt5.6□□□□□ -1.51
RFX1P48743 YPR195CYPR195C 330 nt5.6□□□□□ -1.51
RFX1P48743 NUD1YOR373W 2556 nt5.6□□□□□ -1.51
RFX1P48743 MTQ2YDR140W 666 nt5.59□□□□□ -1.51
RFX1P48743 DON1YDR273W 1098 nt5.59□□□□□ -1.51
RFX1P48743 YDR336WYDR336W 945 nt5.59□□□□□ -1.51
RFX1P48743 WSS1YHR134W 810 nt5.59□□□□□ -1.51
RFX1P48743 MRPL6YHR147C 645 nt5.59□□□□□ -1.51
RFX1P48743 TFS1YLR178C 660 nt5.59□□□□□ -1.51
RFX1P48743 YIP3YNL044W 531 nt5.59□□□□□ -1.51
RFX1P48743 YOL097W-AYOL097W-A 186 nt5.59□□□□□ -1.51
RFX1P48743 VPS68YOL129W 555 nt5.59□□□□□ -1.51
RFX1P48743 SRP101YDR292C 1866 nt5.59□□□□□ -1.51
RFX1P48743 SIA1YOR137C 1869 nt5.59□□□□□ -1.51
RFX1P48743 GIP2YER054C 1647 nt5.59□□□□□ -1.52
RFX1P48743 PCS60YBR222C 1632 nt5.59□□□□□ -1.52
RFX1P48743 DUR1,2YBR208C 5508 nt5.58□□□□□ -1.52
RFX1P48743 ABD1YBR236C 1311 nt5.58□□□□□ -1.52
RFX1P48743 ADY2YCR010C 852 nt5.58□□□□□ -1.52
RFX1P48743 RHB1YCR027C 630 nt5.58□□□□□ -1.52
RFX1P48743 YDL026WYDL026W 312 nt5.58□□□□□ -1.52
RFX1P48743 NSE3YDR288W 912 nt5.58□□□□□ -1.52
RFX1P48743 TCA17YEL048C 459 nt5.58□□□□□ -1.52
RFX1P48743 SOH1YGL127C 384 nt5.58□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 14 ms