Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 ARG82YDR173C 1068 nt7.37□□□□□ -1.23
TY1A-PR2P0CX60 SWM1YDR260C 513 nt7.37□□□□□ -1.23
TY1A-PR2P0CX60 MXR1YER042W 555 nt7.37□□□□□ -1.23
TY1A-PR2P0CX60 RPF1YHR088W 888 nt7.37□□□□□ -1.23
TY1A-PR2P0CX60 PAU7YAR020C 168 nt7.37□□□□□ -1.23
TY1A-PR2P0CX60 NMA1YLR328W 1206 nt7.37□□□□□ -1.23
TY1A-PR2P0CX60 DDR48YMR173W 1293 nt7.37□□□□□ -1.23
TY1A-PR2P0CX60 YBR116CYBR116C 528 nt7.37□□□□□ -1.23
TY1A-PR2P0CX60 GFA1YKL104C 2154 nt7.37□□□□□ -1.23
TY1A-PR2P0CX60 EFM1YHL039W 1758 nt7.36□□□□□ -1.23
TY1A-PR2P0CX60 AIM10YER087W 1731 nt7.36□□□□□ -1.23
TY1A-PR2P0CX60 MET17YLR303W 1335 nt7.36□□□□□ -1.23
TY1A-PR2P0CX60 KTR6YPL053C 1341 nt7.36□□□□□ -1.23
TY1A-PR2P0CX60 ASP1YDR321W 1146 nt7.36□□□□□ -1.23
TY1A-PR2P0CX60 TYS1YGR185C 1185 nt7.36□□□□□ -1.23
TY1A-PR2P0CX60 YJR141WYJR141W 1044 nt7.36□□□□□ -1.23
TY1A-PR2P0CX60 YKL023WYKL023W 834 nt7.36□□□□□ -1.23
TY1A-PR2P0CX60 YKL031WYKL031W 414 nt7.36□□□□□ -1.23
TY1A-PR2P0CX60 CPT1YNL130C 1182 nt7.36□□□□□ -1.23
TY1A-PR2P0CX60 SPS19YNL202W 879 nt7.36□□□□□ -1.23
TY1A-PR2P0CX60 YNL320WYNL320W 855 nt7.36□□□□□ -1.23
TY1A-PR2P0CX60 UIP4YPL186C 915 nt7.36□□□□□ -1.23
TY1A-PR2P0CX60 MRPL37YBR268W 318 nt7.36□□□□□ -1.23
TY1A-PR2P0CX60 DUN1YDL101C 1542 nt7.36□□□□□ -1.23
TY1A-PR2P0CX60 FYV1YDR024W 486 nt7.35□□□□□ -1.23
TY1A-PR2P0CX60 NUP42YDR192C 1293 nt7.35□□□□□ -1.23
TY1A-PR2P0CX60 YER165C-AYER165C-A 357 nt7.35□□□□□ -1.23
TY1A-PR2P0CX60 COS12YGL263W 1143 nt7.35□□□□□ -1.23
TY1A-PR2P0CX60 LDS1YAL018C 978 nt7.35□□□□□ -1.23
TY1A-PR2P0CX60 ILM1YJR118C 612 nt7.35□□□□□ -1.23
TY1A-PR2P0CX60 YLR101CYLR101C 396 nt7.35□□□□□ -1.23
TY1A-PR2P0CX60 SNO4YMR322C 714 nt7.35□□□□□ -1.23
TY1A-PR2P0CX60 MIX23YBL107C 591 nt7.35□□□□□ -1.23
TY1A-PR2P0CX60 IAH1YOR126C 717 nt7.35□□□□□ -1.23
TY1A-PR2P0CX60 PNT1YOR266W 1272 nt7.35□□□□□ -1.23
TY1A-PR2P0CX60 HSP33YOR391C 714 nt7.35□□□□□ -1.23
TY1A-PR2P0CX60 HSP32YPL280W 714 nt7.35□□□□□ -1.23
TY1A-PR2P0CX60 POL30YBR088C 777 nt7.35□□□□□ -1.23
TY1A-PR2P0CX60 LAP2YNL045W 2016 nt7.35□□□□□ -1.23
TY1A-PR2P0CX60 PHO89YBR296C 1725 nt7.35□□□□□ -1.23
TY1A-PR2P0CX60 PHO3YBR092C 1404 nt7.35□□□□□ -1.23
TY1A-PR2P0CX60 ADE5,7YGL234W 2409 nt7.35□□□□□ -1.23
TY1A-PR2P0CX60 YNL247WYNL247W 2304 nt7.34□□□□□ -1.23
TY1A-PR2P0CX60 HSV2YGR223C 1347 nt7.34□□□□□ -1.23
TY1A-PR2P0CX60 SRY1YKL218C 981 nt7.34□□□□□ -1.23
TY1A-PR2P0CX60 COS9YKL219W 1224 nt7.34□□□□□ -1.23
TY1A-PR2P0CX60 YBL077WYBL077W 432 nt7.34□□□□□ -1.23
TY1A-PR2P0CX60 RRG9YNL213C 645 nt7.34□□□□□ -1.23
TY1A-PR2P0CX60 IRC13YOR235W 315 nt7.34□□□□□ -1.23
TY1A-PR2P0CX60 IML3YBR107C 738 nt7.34□□□□□ -1.23
TY1A-PR2P0CX60 YCL049CYCL049C 939 nt7.34□□□□□ -1.23
TY1A-PR2P0CX60 SLT2YHR030C 1455 nt7.34□□□□□ -1.23
TY1A-PR2P0CX60 EHT1YBR177C 1356 nt7.33□□□□□ -1.24
TY1A-PR2P0CX60 CRN1YLR429W 1956 nt7.33□□□□□ -1.24
TY1A-PR2P0CX60 NPL4YBR170C 1743 nt7.33□□□□□ -1.24
TY1A-PR2P0CX60 NOP8YOL144W 1455 nt7.33□□□□□ -1.24
TY1A-PR2P0CX60 HSP42YDR171W 1128 nt7.33□□□□□ -1.24
TY1A-PR2P0CX60 YDR467CYDR467C 327 nt7.33□□□□□ -1.24
TY1A-PR2P0CX60 RPL22BYFL034C-A 369 nt7.33□□□□□ -1.24
TY1A-PR2P0CX60 NPA3YJR072C 1158 nt7.33□□□□□ -1.24
TY1A-PR2P0CX60 YJU2YKL095W 837 nt7.33□□□□□ -1.24
TY1A-PR2P0CX60 EMC3YKL207W 762 nt7.33□□□□□ -1.24
TY1A-PR2P0CX60 BET3YKR068C 582 nt7.33□□□□□ -1.24
TY1A-PR2P0CX60 GSP1YLR293C 660 nt7.33□□□□□ -1.24
TY1A-PR2P0CX60 CDC73YLR418C 1182 nt7.33□□□□□ -1.24
TY1A-PR2P0CX60 RNA1YMR235C 1224 nt7.33□□□□□ -1.24
TY1A-PR2P0CX60 PUP1YOR157C 786 nt7.33□□□□□ -1.24
TY1A-PR2P0CX60 ATP4YPL078C 735 nt7.33□□□□□ -1.24
TY1A-PR2P0CX60 GIP2YER054C 1647 nt7.33□□□□□ -1.24
TY1A-PR2P0CX60 AFG2YLR397C 2343 nt7.32□□□□□ -1.24
TY1A-PR2P0CX60 SLM3YDL033C 1254 nt7.32□□□□□ -1.24
TY1A-PR2P0CX60 NPY1YGL067W 1155 nt7.32□□□□□ -1.24
TY1A-PR2P0CX60 GLG2YJL137C 1143 nt7.32□□□□□ -1.24
TY1A-PR2P0CX60 LOT5YKL183W 921 nt7.32□□□□□ -1.24
TY1A-PR2P0CX60 SPC3YLR066W 555 nt7.32□□□□□ -1.24
TY1A-PR2P0CX60 FYV12YOR183W 390 nt7.32□□□□□ -1.24
TY1A-PR2P0CX60 PLP2YOR281C 861 nt7.32□□□□□ -1.24
TY1A-PR2P0CX60 FIT3YOR383C 615 nt7.32□□□□□ -1.24
TY1A-PR2P0CX60 YCL001W-AYCL001W-A 462 nt7.32□□□□□ -1.24
TY1A-PR2P0CX60 SUV3YPL029W 2214 nt7.32□□□□□ -1.24
TY1A-PR2P0CX60 AAT1YKL106W 1356 nt7.32□□□□□ -1.24
TY1A-PR2P0CX60 ERG8YMR220W 1356 nt7.32□□□□□ -1.24
TY1A-PR2P0CX60 TMA64YDR117C 1698 nt7.32□□□□□ -1.24
TY1A-PR2P0CX60 TRM11YOL124C 1302 nt7.31□□□□□ -1.24
TY1A-PR2P0CX60 YGR293CYGR293C 462 nt7.31□□□□□ -1.24
TY1A-PR2P0CX60 PUT1YLR142W 1431 nt7.31□□□□□ -1.24
TY1A-PR2P0CX60 YMR082CYMR082C 357 nt7.31□□□□□ -1.24
TY1A-PR2P0CX60 TOA1YOR194C 861 nt7.31□□□□□ -1.24
TY1A-PR2P0CX60 YBR300CYBR300C 498 nt7.31□□□□□ -1.24
TY1A-PR2P0CX60 PRO2YOR323C 1371 nt7.31□□□□□ -1.24
TY1A-PR2P0CX60 GND1YHR183W 1470 nt7.3□□□□□ -1.24
TY1A-PR2P0CX60 CHS5YLR330W 2016 nt7.3□□□□□ -1.24
TY1A-PR2P0CX60 MAL13YGR288W 1422 nt7.3□□□□□ -1.24
TY1A-PR2P0CX60 snR7-LsnR7-L 214 nt7.3□□□□□ -1.24
TY1A-PR2P0CX60 YDR203WYDR203W 318 nt7.3□□□□□ -1.24
TY1A-PR2P0CX60 YGR109W-AYGR109W-A 873 nt7.3□□□□□ -1.24
TY1A-PR2P0CX60 YAP3YHL009C 993 nt7.3□□□□□ -1.24
TY1A-PR2P0CX60 YMR001C-AYMR001C-A 231 nt7.3□□□□□ -1.24
TY1A-PR2P0CX60 IRC21YMR073C 606 nt7.3□□□□□ -1.24
TY1A-PR2P0CX60 YNL162W-AYNL162W-A 219 nt7.3□□□□□ -1.24
Retrieved 100 of 7,029 protein–RNA pairs in 21.5 ms