Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ALDH1A1P00352 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC26.8■■□□□ 1.88
ALDH1A1P00352 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ALDH1A1P00352 BX842568.3-201ENST00000418104 571 ntBASIC26.8■■□□□ 1.88
ALDH1A1P00352 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC26.8■■□□□ 1.88
ALDH1A1P00352 YBX1P1-201ENST00000445822 960 ntBASIC26.8■■□□□ 1.88
ALDH1A1P00352 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.8■■□□□ 1.88
ALDH1A1P00352 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC26.8■■□□□ 1.88
ALDH1A1P00352 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.8■■□□□ 1.88
ALDH1A1P00352 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ALDH1A1P00352 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
ALDH1A1P00352 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ALDH1A1P00352 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
ALDH1A1P00352 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ALDH1A1P00352 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ALDH1A1P00352 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.79■■□□□ 1.88
ALDH1A1P00352 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC26.79■■□□□ 1.88
ALDH1A1P00352 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ALDH1A1P00352 AC241377.3-202ENST00000626088 1088 ntBASIC26.79■■□□□ 1.88
ALDH1A1P00352 AC241585.3-202ENST00000628937 1088 ntBASIC26.79■■□□□ 1.88
ALDH1A1P00352 AC245100.8-202ENST00000629247 1058 ntBASIC26.79■■□□□ 1.88
ALDH1A1P00352 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
ALDH1A1P00352 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ALDH1A1P00352 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ALDH1A1P00352 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ALDH1A1P00352 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.78■■□□□ 1.88
ALDH1A1P00352 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC26.78■■□□□ 1.88
ALDH1A1P00352 GRAMD4P2-201ENST00000423297 1097 ntBASIC26.78■■□□□ 1.88
ALDH1A1P00352 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.78■■□□□ 1.88
ALDH1A1P00352 AC092437.1-201ENST00000624794 1048 ntBASIC26.78■■□□□ 1.88
ALDH1A1P00352 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ALDH1A1P00352 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ALDH1A1P00352 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
ALDH1A1P00352 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ALDH1A1P00352 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ALDH1A1P00352 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.77■■□□□ 1.88
ALDH1A1P00352 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ALDH1A1P00352 HACD1-201ENST00000326961 773 ntTSL 2 BASIC26.77■■□□□ 1.88
ALDH1A1P00352 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
ALDH1A1P00352 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ALDH1A1P00352 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.77■■□□□ 1.88
ALDH1A1P00352 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC26.77■■□□□ 1.88
ALDH1A1P00352 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ALDH1A1P00352 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.76■■□□□ 1.87
ALDH1A1P00352 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ALDH1A1P00352 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ALDH1A1P00352 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ALDH1A1P00352 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC26.76■■□□□ 1.87
ALDH1A1P00352 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.76■■□□□ 1.87
ALDH1A1P00352 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.76■■□□□ 1.87
ALDH1A1P00352 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ALDH1A1P00352 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ALDH1A1P00352 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
ALDH1A1P00352 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
ALDH1A1P00352 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
ALDH1A1P00352 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC26.75■■□□□ 1.87
ALDH1A1P00352 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ALDH1A1P00352 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.74■■□□□ 1.87
ALDH1A1P00352 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC26.74■■□□□ 1.87
ALDH1A1P00352 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.73■■□□□ 1.87
ALDH1A1P00352 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC26.73■■□□□ 1.87
ALDH1A1P00352 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
ALDH1A1P00352 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.73■■□□□ 1.87
ALDH1A1P00352 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
ALDH1A1P00352 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC26.72■■□□□ 1.87
ALDH1A1P00352 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ALDH1A1P00352 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
ALDH1A1P00352 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ALDH1A1P00352 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC26.71■■□□□ 1.87
ALDH1A1P00352 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.71■■□□□ 1.87
ALDH1A1P00352 AC009102.2-201ENST00000606772 1639 ntBASIC26.71■■□□□ 1.87
ALDH1A1P00352 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
ALDH1A1P00352 AC004911.1-201ENST00000416316 871 ntBASIC26.7■■□□□ 1.86
ALDH1A1P00352 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC26.7■■□□□ 1.86
ALDH1A1P00352 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.7■■□□□ 1.86
ALDH1A1P00352 DLX3-202ENST00000512495 834 ntTSL 2 BASIC26.7■■□□□ 1.86
ALDH1A1P00352 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC26.7■■□□□ 1.86
ALDH1A1P00352 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ALDH1A1P00352 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
ALDH1A1P00352 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ALDH1A1P00352 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC26.69■■□□□ 1.86
ALDH1A1P00352 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.69■■□□□ 1.86
ALDH1A1P00352 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ALDH1A1P00352 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ALDH1A1P00352 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ALDH1A1P00352 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ALDH1A1P00352 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
ALDH1A1P00352 DUX4L2-201ENST00000561772 1275 ntBASIC26.69■■□□□ 1.86
ALDH1A1P00352 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
ALDH1A1P00352 RAB43-208ENST00000615093 783 ntTSL 5 BASIC26.69■■□□□ 1.86
ALDH1A1P00352 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC26.69■■□□□ 1.86
ALDH1A1P00352 DUX4L6-201ENST00000626483 1275 ntBASIC26.69■■□□□ 1.86
ALDH1A1P00352 DUX4L1-201ENST00000627662 1275 ntBASIC26.69■■□□□ 1.86
ALDH1A1P00352 DUX4L8-201ENST00000629013 1275 ntBASIC26.69■■□□□ 1.86
ALDH1A1P00352 DUX4L3-201ENST00000630187 1275 ntBASIC26.69■■□□□ 1.86
ALDH1A1P00352 DUX4L7-201ENST00000630678 1275 ntBASIC26.69■■□□□ 1.86
ALDH1A1P00352 DUX4L5-201ENST00000630834 1275 ntBASIC26.69■■□□□ 1.86
ALDH1A1P00352 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.68■■□□□ 1.86
ALDH1A1P00352 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC26.68■■□□□ 1.86
ALDH1A1P00352 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms