Protein–RNA interactions for Protein: A0A140T8M7

Rpl23a-ps3, Ribosomal protein L23A, pseudogene 3, mousemouse

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl23a-ps3A0A140T8M7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.32■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.32■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.31■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.3■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.3■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.29■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.29■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.29■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.28■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpl23a-ps3A0A140T8M7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.26■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.24■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.23■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms