Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFT43Q96FT9 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFT43Q96FT9 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IFT43Q96FT9 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 OR8S1-201ENST00000310194 1080 ntBASIC15.88■□□□□ 0.13
IFT43Q96FT9 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFT43Q96FT9 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFT43Q96FT9 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFT43Q96FT9 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IFT43Q96FT9 LINC01115-203ENST00000606068 577 ntBASIC15.88■□□□□ 0.13
IFT43Q96FT9 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFT43Q96FT9 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IFT43Q96FT9 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFT43Q96FT9 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFT43Q96FT9 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IFT43Q96FT9 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFT43Q96FT9 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFT43Q96FT9 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IFT43Q96FT9 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFT43Q96FT9 AC009090.5-201ENST00000624886 2285 ntBASIC15.88■□□□□ 0.13
IFT43Q96FT9 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFT43Q96FT9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFT43Q96FT9 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 SLC7A15P-201ENST00000424028 1363 ntBASIC15.87■□□□□ 0.13
IFT43Q96FT9 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 AC006486.2-201ENST00000624246 2199 ntBASIC15.87■□□□□ 0.13
IFT43Q96FT9 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 GNAQP1-201ENST00000444815 1067 ntBASIC15.87■□□□□ 0.13
IFT43Q96FT9 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 OR2I1P-209ENST00000641730 5365 ntBASIC15.87■□□□□ 0.13
IFT43Q96FT9 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT43Q96FT9 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.87■□□□□ 0.13
IFT43Q96FT9 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms