Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 AC011477.6-201ENST00000604980 1927 ntBASIC11.48□□□□□ -0.57
RNF183Q96D59 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RNF183Q96D59 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
RNF183Q96D59 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC11.48□□□□□ -0.57
RNF183Q96D59 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
RNF183Q96D59 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RNF183Q96D59 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RNF183Q96D59 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC11.48□□□□□ -0.57
RNF183Q96D59 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 AC079328.2-201ENST00000561241 3354 ntBASIC11.48□□□□□ -0.57
RNF183Q96D59 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RNF183Q96D59 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
RNF183Q96D59 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.48□□□□□ -0.57
RNF183Q96D59 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 AL512384.1-201ENST00000406683 331 ntBASIC11.48□□□□□ -0.57
RNF183Q96D59 AC074338.1-201ENST00000416825 156 ntBASIC11.48□□□□□ -0.57
RNF183Q96D59 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
RNF183Q96D59 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.48□□□□□ -0.57
RNF183Q96D59 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC11.48□□□□□ -0.57
RNF183Q96D59 INE1-201ENST00000456273 945 ntBASIC11.48□□□□□ -0.57
RNF183Q96D59 RN7SL399P-201ENST00000471648 279 ntBASIC11.48□□□□□ -0.57
RNF183Q96D59 ELK1P1-201ENST00000485699 580 ntBASIC11.48□□□□□ -0.57
RNF183Q96D59 SLED1-202ENST00000512051 380 ntBASIC11.48□□□□□ -0.57
RNF183Q96D59 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC11.48□□□□□ -0.57
RNF183Q96D59 NEU3-203ENST00000529024 581 ntTSL 3 BASIC11.48□□□□□ -0.57
RNF183Q96D59 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC11.48□□□□□ -0.57
RNF183Q96D59 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.48□□□□□ -0.57
RNF183Q96D59 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.48□□□□□ -0.57
RNF183Q96D59 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC11.48□□□□□ -0.57
RNF183Q96D59 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.48□□□□□ -0.57
RNF183Q96D59 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RNF183Q96D59 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC11.48□□□□□ -0.57
RNF183Q96D59 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
RNF183Q96D59 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
RNF183Q96D59 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.48□□□□□ -0.57
RNF183Q96D59 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 BLK-205ENST00000529894 2017 ntTSL 5 BASIC11.48□□□□□ -0.57
RNF183Q96D59 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC11.48□□□□□ -0.57
RNF183Q96D59 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
RNF183Q96D59 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
RNF183Q96D59 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
RNF183Q96D59 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
RNF183Q96D59 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
RNF183Q96D59 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC11.47□□□□□ -0.57
RNF183Q96D59 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC11.47□□□□□ -0.57
RNF183Q96D59 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC11.47□□□□□ -0.57
RNF183Q96D59 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RNF183Q96D59 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC11.47□□□□□ -0.57
RNF183Q96D59 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RNF183Q96D59 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC11.47□□□□□ -0.57
RNF183Q96D59 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RNF183Q96D59 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC11.47□□□□□ -0.57
RNF183Q96D59 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11.47□□□□□ -0.57
RNF183Q96D59 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RNF183Q96D59 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
RNF183Q96D59 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
RNF183Q96D59 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RNF183Q96D59 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC11.47□□□□□ -0.57
RNF183Q96D59 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC11.47□□□□□ -0.57
RNF183Q96D59 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RNF183Q96D59 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RNF183Q96D59 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RNF183Q96D59 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.47□□□□□ -0.57
RNF183Q96D59 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RNF183Q96D59 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RNF183Q96D59 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RNF183Q96D59 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RNF183Q96D59 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
RNF183Q96D59 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
RNF183Q96D59 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC11.47□□□□□ -0.57
RNF183Q96D59 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
RNF183Q96D59 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.47□□□□□ -0.57
RNF183Q96D59 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC11.47□□□□□ -0.57
RNF183Q96D59 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC11.47□□□□□ -0.57
RNF183Q96D59 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC11.47□□□□□ -0.57
RNF183Q96D59 GIMAP3P-201ENST00000495150 836 ntBASIC11.47□□□□□ -0.57
RNF183Q96D59 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
RNF183Q96D59 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RNF183Q96D59 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC11.47□□□□□ -0.57
RNF183Q96D59 HNRNPUP1-201ENST00000554987 333 ntBASIC11.47□□□□□ -0.57
RNF183Q96D59 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC11.47□□□□□ -0.57
RNF183Q96D59 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC11.47□□□□□ -0.57
RNF183Q96D59 CTBP2P3-201ENST00000585629 1255 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms