Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1bQ920F6 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.17□□□□□ -0.14
Smc1bQ920F6 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Smc1bQ920F6 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.17□□□□□ -0.14
Smc1bQ920F6 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1bQ920F6 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1bQ920F6 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1bQ920F6 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1bQ920F6 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1bQ920F6 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.17□□□□□ -0.14
Smc1bQ920F6 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1bQ920F6 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Gm8194-201ENSMUST00000159783 859 ntBASIC14.16□□□□□ -0.14
Smc1bQ920F6 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Mir7221-201ENSMUST00000184009 72 ntBASIC14.16□□□□□ -0.14
Smc1bQ920F6 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Gm17812-201ENSMUST00000204935 318 ntBASIC14.16□□□□□ -0.14
Smc1bQ920F6 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.16□□□□□ -0.14
Smc1bQ920F6 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smc1bQ920F6 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.16□□□□□ -0.14
Smc1bQ920F6 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1bQ920F6 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.15□□□□□ -0.14
Smc1bQ920F6 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.15□□□□□ -0.14
Smc1bQ920F6 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Gm13736-201ENSMUST00000119272 253 ntBASIC14.15□□□□□ -0.14
Smc1bQ920F6 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.15□□□□□ -0.14
Smc1bQ920F6 Gm32999-201ENSMUST00000192693 562 ntBASIC14.15□□□□□ -0.14
Smc1bQ920F6 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.15□□□□□ -0.14
Smc1bQ920F6 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc1bQ920F6 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.14□□□□□ -0.15
Smc1bQ920F6 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.14□□□□□ -0.15
Smc1bQ920F6 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Gm23363-201ENSMUST00000175024 79 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms