Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 ST20-AS1-201ENST00000560255 4223 ntBASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 TSEN15P1-201ENST00000423257 515 ntBASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLHC1Q8NHS4 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 AC015922.1-201ENST00000421102 1152 ntBASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 GHSR-202ENST00000427970 912 ntBASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 RPL13P2-201ENST00000440687 659 ntBASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 RN7SL618P-201ENST00000477850 296 ntBASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 AC125807.1-201ENST00000483097 614 ntBASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 AC010336.2-201ENST00000564226 506 ntBASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 AC051619.7-201ENST00000568314 623 ntBASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 AC025181.2-201ENST00000606994 802 ntBASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms