Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTR9Q6PD62 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTR9Q6PD62 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTR9Q6PD62 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTR9Q6PD62 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.18■□□□□ 0.5
CTR9Q6PD62 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTR9Q6PD62 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTR9Q6PD62 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTR9Q6PD62 TMBIM7P-203ENST00000641617 1718 ntBASIC18.18■□□□□ 0.5
CTR9Q6PD62 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTR9Q6PD62 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTR9Q6PD62 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.18■□□□□ 0.5
CTR9Q6PD62 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTR9Q6PD62 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CTR9Q6PD62 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CTR9Q6PD62 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.18■□□□□ 0.5
CTR9Q6PD62 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTR9Q6PD62 KRT8P14-201ENST00000414254 1442 ntBASIC18.18■□□□□ 0.5
CTR9Q6PD62 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.18■□□□□ 0.5
CTR9Q6PD62 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.18■□□□□ 0.5
CTR9Q6PD62 AC099336.1-201ENST00000417053 1171 ntBASIC18.18■□□□□ 0.5
CTR9Q6PD62 HLA-K-203ENST00000430151 1046 ntBASIC18.18■□□□□ 0.5
CTR9Q6PD62 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CTR9Q6PD62 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTR9Q6PD62 RPS2P32-201ENST00000439199 892 ntBASIC18.18■□□□□ 0.5
CTR9Q6PD62 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.18■□□□□ 0.5
CTR9Q6PD62 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.18■□□□□ 0.5
CTR9Q6PD62 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CTR9Q6PD62 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTR9Q6PD62 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.18■□□□□ 0.5
CTR9Q6PD62 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTR9Q6PD62 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTR9Q6PD62 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTR9Q6PD62 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CTR9Q6PD62 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTR9Q6PD62 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTR9Q6PD62 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTR9Q6PD62 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTR9Q6PD62 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTR9Q6PD62 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CTR9Q6PD62 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTR9Q6PD62 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTR9Q6PD62 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTR9Q6PD62 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTR9Q6PD62 AC105917.1-201ENST00000506637 2539 ntBASIC18.17■□□□□ 0.5
CTR9Q6PD62 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTR9Q6PD62 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTR9Q6PD62 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTR9Q6PD62 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTR9Q6PD62 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTR9Q6PD62 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 BNIP3P42-201ENST00000454982 569 ntBASIC18.17■□□□□ 0.5
CTR9Q6PD62 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTR9Q6PD62 BNIP3P29-201ENST00000598302 571 ntBASIC18.17■□□□□ 0.5
CTR9Q6PD62 AC011447.5-201ENST00000616168 564 ntBASIC18.17■□□□□ 0.5
CTR9Q6PD62 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTR9Q6PD62 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTR9Q6PD62 AL359258.3-201ENST00000622910 2331 ntBASIC18.17■□□□□ 0.5
CTR9Q6PD62 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTR9Q6PD62 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTR9Q6PD62 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTR9Q6PD62 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTR9Q6PD62 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTR9Q6PD62 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTR9Q6PD62 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CTR9Q6PD62 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTR9Q6PD62 KRT8P44-201ENST00000441609 1350 ntBASIC18.17■□□□□ 0.5
CTR9Q6PD62 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTR9Q6PD62 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTR9Q6PD62 REXO1L5P-201ENST00000622260 2098 ntBASIC18.16■□□□□ 0.5
CTR9Q6PD62 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTR9Q6PD62 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTR9Q6PD62 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms