Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCN3P51790 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCN3P51790 AC007969.1-201ENST00000433675 447 ntBASIC16.75■□□□□ 0.27
CLCN3P51790 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.75■□□□□ 0.27
CLCN3P51790 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 AL391280.1-201ENST00000506969 1062 ntBASIC16.75■□□□□ 0.27
CLCN3P51790 COX5BP1-201ENST00000507622 393 ntBASIC16.75■□□□□ 0.27
CLCN3P51790 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.75■□□□□ 0.27
CLCN3P51790 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCN3P51790 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CLCN3P51790 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.75■□□□□ 0.27
CLCN3P51790 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCN3P51790 EEF1DP1-201ENST00000585891 896 ntBASIC16.75■□□□□ 0.27
CLCN3P51790 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCN3P51790 AC243960.2-201ENST00000600996 747 ntBASIC16.75■□□□□ 0.27
CLCN3P51790 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.75■□□□□ 0.27
CLCN3P51790 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.75■□□□□ 0.27
CLCN3P51790 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CLCN3P51790 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.75■□□□□ 0.27
CLCN3P51790 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 AL137783.1-201ENST00000623494 1896 ntBASIC16.75■□□□□ 0.27
CLCN3P51790 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CLCN3P51790 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLCN3P51790 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN3P51790 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCN3P51790 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CLCN3P51790 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN3P51790 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN3P51790 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CLCN3P51790 CLUHP2-201ENST00000426660 1303 ntBASIC16.74■□□□□ 0.27
CLCN3P51790 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN3P51790 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN3P51790 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN3P51790 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN3P51790 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN3P51790 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CLCN3P51790 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN3P51790 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN3P51790 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN3P51790 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN3P51790 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN3P51790 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN3P51790 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN3P51790 MTX1P1-201ENST00000440904 838 ntBASIC16.74■□□□□ 0.27
CLCN3P51790 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CLCN3P51790 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN3P51790 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.74■□□□□ 0.27
CLCN3P51790 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.74■□□□□ 0.27
CLCN3P51790 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.74■□□□□ 0.27
CLCN3P51790 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CLCN3P51790 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
CLCN3P51790 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN3P51790 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.74■□□□□ 0.27
CLCN3P51790 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.74■□□□□ 0.27
CLCN3P51790 MIR6787-201ENST00000616675 61 ntBASIC16.74■□□□□ 0.27
CLCN3P51790 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.74■□□□□ 0.27
CLCN3P51790 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN3P51790 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN3P51790 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN3P51790 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.74■□□□□ 0.27
CLCN3P51790 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.74■□□□□ 0.27
CLCN3P51790 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.74■□□□□ 0.27
CLCN3P51790 KRT8P44-201ENST00000441609 1350 ntBASIC16.74■□□□□ 0.27
CLCN3P51790 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN3P51790 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
CLCN3P51790 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN3P51790 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.74■□□□□ 0.27
CLCN3P51790 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN3P51790 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.74■□□□□ 0.27
CLCN3P51790 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN3P51790 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN3P51790 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLCN3P51790 AC023024.2-201ENST00000623561 1993 ntBASIC16.73■□□□□ 0.27
CLCN3P51790 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN3P51790 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CLCN3P51790 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN3P51790 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN3P51790 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.73■□□□□ 0.27
CLCN3P51790 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN3P51790 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN3P51790 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLCN3P51790 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN3P51790 BTBD6P1-201ENST00000412176 1267 ntBASIC16.73■□□□□ 0.27
CLCN3P51790 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN3P51790 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.73■□□□□ 0.27
CLCN3P51790 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN3P51790 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.73■□□□□ 0.27
CLCN3P51790 RPSAP36-202ENST00000494591 1261 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms