Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC008494.3-201ENST00000606615 944 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AC084876.1-201ENST00000612793 641 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 LINC01730-201ENST00000613868 843 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AL358852.1-201ENST00000623174 1268 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 LINC01727-202ENST00000623256 1218 ntTSL 4 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AC004009.3-201ENST00000624160 645 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 MTND5P27-201ENST00000428871 1720 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AL022578.1-201ENST00000439330 1433 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 FGG-205ENST00000407946 1636 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 EEF1A1P11-201ENST00000415278 1389 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 KRT8P24-201ENST00000560290 1559 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 ZNF734P-201ENST00000419494 1534 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 Y_RNA.193-201ENST00000363979 102 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 Y_RNA.202-201ENST00000364083 110 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 Y_RNA.402-201ENST00000383972 102 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 AL096711.1-201ENST00000404780 554 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 HMGB3P18-201ENST00000406327 590 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 TPM3P1-201ENST00000413233 747 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 PA2G4P2-201ENST00000414718 1200 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 AL450226.1-201ENST00000414776 710 ntTSL 2 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 DCTN1-AS1-202ENST00000416630 584 ntTSL 4 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 AL023755.1-203ENST00000422253 519 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 RPSAP11-201ENST00000443010 881 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 HNRNPA1P10-201ENST00000444945 962 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 PSPHP1-201ENST00000450062 261 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 OR6C5P-201ENST00000452388 923 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 OR13C1P-201ENST00000457612 963 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 AC026348.1-201ENST00000462549 1053 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 RPL5P17-201ENST00000469685 877 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 RBBP4P2-201ENST00000478252 1264 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 LINC01033-201ENST00000504609 735 ntTSL 5 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 AC021146.7-201ENST00000509604 775 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 HIGD1AP18-201ENST00000520730 278 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 AK6P1-201ENST00000540219 478 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 AC018630.1-201ENST00000541376 925 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 AC007954.1-201ENST00000554198 494 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 AC019322.1-201ENST00000571869 389 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 AL359535.1-201ENST00000612100 1087 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 AL157813.1-201ENST00000612996 587 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 AL357080.1-201ENST00000617394 239 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 MIR6084-201ENST00000622012 110 ntBASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 CBR3-AS1-214ENST00000624080 822 ntTSL 5 BASIC9.88□□□□□ -0.83
KRTAP3-3Q9BYR6 AC116563.2-201ENST00000624751 535 ntBASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms