Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PCDH1Q08174 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDH1Q08174 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.84□□□□□ -0.03
PCDH1Q08174 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH1Q08174 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH1Q08174 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH1Q08174 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDH1Q08174 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
PCDH1Q08174 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH1Q08174 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PCDH1Q08174 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDH1Q08174 AC004066.1-201ENST00000502488 802 ntBASIC14.84□□□□□ -0.03
PCDH1Q08174 DOC2GP-202ENST00000514950 1163 ntBASIC14.84□□□□□ -0.03
PCDH1Q08174 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDH1Q08174 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDH1Q08174 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDH1Q08174 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH1Q08174 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH1Q08174 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PCDH1Q08174 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH1Q08174 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH1Q08174 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH1Q08174 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH1Q08174 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDH1Q08174 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH1Q08174 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH1Q08174 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH1Q08174 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
PCDH1Q08174 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCDH1Q08174 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
PCDH1Q08174 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDH1Q08174 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDH1Q08174 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDH1Q08174 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDH1Q08174 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDH1Q08174 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
PCDH1Q08174 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDH1Q08174 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDH1Q08174 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PCDH1Q08174 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH1Q08174 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH1Q08174 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDH1Q08174 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDH1Q08174 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH1Q08174 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH1Q08174 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDH1Q08174 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDH1Q08174 FAM86LP-201ENST00000478302 853 ntBASIC14.83□□□□□ -0.04
PCDH1Q08174 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDH1Q08174 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDH1Q08174 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
PCDH1Q08174 AC104794.3-201ENST00000566840 1248 ntBASIC14.83□□□□□ -0.04
PCDH1Q08174 AC036164.1-201ENST00000570544 333 ntBASIC14.83□□□□□ -0.04
PCDH1Q08174 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH1Q08174 BRI3BPP1-201ENST00000594224 787 ntBASIC14.83□□□□□ -0.04
PCDH1Q08174 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDH1Q08174 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDH1Q08174 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.83□□□□□ -0.04
PCDH1Q08174 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDH1Q08174 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH1Q08174 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH1Q08174 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH1Q08174 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH1Q08174 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH1Q08174 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDH1Q08174 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH1Q08174 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH1Q08174 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PCDH1Q08174 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH1Q08174 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH1Q08174 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH1Q08174 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH1Q08174 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PCDH1Q08174 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH1Q08174 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDH1Q08174 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH1Q08174 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.83□□□□□ -0.04
PCDH1Q08174 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PCDH1Q08174 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 AC007787.1-201ENST00000588095 1583 ntBASIC14.82□□□□□ -0.04
PCDH1Q08174 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
PCDH1Q08174 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDH1Q08174 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PCDH1Q08174 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
PCDH1Q08174 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.82□□□□□ -0.04
PCDH1Q08174 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDH1Q08174 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDH1Q08174 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDH1Q08174 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PCDH1Q08174 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms