Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.68□□□□□ -0.38
CCL3L1P16619 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.68□□□□□ -0.38
CCL3L1P16619 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL3L1P16619 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 AL035633.1-201ENST00000406139 838 ntBASIC12.68□□□□□ -0.38
CCL3L1P16619 SOCS2P1-201ENST00000417727 557 ntBASIC12.68□□□□□ -0.38
CCL3L1P16619 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.68□□□□□ -0.38
CCL3L1P16619 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.68□□□□□ -0.38
CCL3L1P16619 GHSR-202ENST00000427970 912 ntBASIC12.68□□□□□ -0.38
CCL3L1P16619 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.68□□□□□ -0.38
CCL3L1P16619 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.68□□□□□ -0.38
CCL3L1P16619 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.68□□□□□ -0.38
CCL3L1P16619 AC004066.1-201ENST00000502488 802 ntBASIC12.68□□□□□ -0.38
CCL3L1P16619 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.68□□□□□ -0.38
CCL3L1P16619 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.68□□□□□ -0.38
CCL3L1P16619 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.68□□□□□ -0.38
CCL3L1P16619 AP005018.1-201ENST00000525475 301 ntBASIC12.68□□□□□ -0.38
CCL3L1P16619 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.68□□□□□ -0.38
CCL3L1P16619 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 SAMD11P1-201ENST00000571429 661 ntBASIC12.68□□□□□ -0.38
CCL3L1P16619 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL3L1P16619 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL3L1P16619 AC027307.3-201ENST00000594262 1100 ntBASIC12.68□□□□□ -0.38
CCL3L1P16619 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.68□□□□□ -0.38
CCL3L1P16619 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CCL3L1P16619 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.68□□□□□ -0.38
CCL3L1P16619 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CCL3L1P16619 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CCL3L1P16619 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL3L1P16619 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.68□□□□□ -0.38
CCL3L1P16619 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
CCL3L1P16619 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3L1P16619 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3L1P16619 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL3L1P16619 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL3L1P16619 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CCL3L1P16619 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3L1P16619 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3L1P16619 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3L1P16619 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3L1P16619 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3L1P16619 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.67□□□□□ -0.38
CCL3L1P16619 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL3L1P16619 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3L1P16619 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL3L1P16619 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CCL3L1P16619 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CCL3L1P16619 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3L1P16619 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3L1P16619 REXO1L4P-201ENST00000605109 1937 ntBASIC12.67□□□□□ -0.38
CCL3L1P16619 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3L1P16619 AP006294.1-201ENST00000415407 339 ntBASIC12.67□□□□□ -0.38
CCL3L1P16619 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.67□□□□□ -0.38
CCL3L1P16619 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.67□□□□□ -0.38
CCL3L1P16619 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.67□□□□□ -0.38
CCL3L1P16619 RN7SL692P-201ENST00000464677 288 ntBASIC12.67□□□□□ -0.38
CCL3L1P16619 AP001582.1-201ENST00000525856 295 ntBASIC12.67□□□□□ -0.38
CCL3L1P16619 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.67□□□□□ -0.38
CCL3L1P16619 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL3L1P16619 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL3L1P16619 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.67□□□□□ -0.38
CCL3L1P16619 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.67□□□□□ -0.38
CCL3L1P16619 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL3L1P16619 AC093813.1-201ENST00000605066 256 ntBASIC12.67□□□□□ -0.38
CCL3L1P16619 LINC02084-201ENST00000606069 1096 ntBASIC12.67□□□□□ -0.38
CCL3L1P16619 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL3L1P16619 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CCL3L1P16619 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.67□□□□□ -0.38
CCL3L1P16619 CU634019.7-201ENST00000624153 1185 ntBASIC12.67□□□□□ -0.38
CCL3L1P16619 FP236241.2-201ENST00000624906 1185 ntBASIC12.67□□□□□ -0.38
CCL3L1P16619 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CCL3L1P16619 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL3L1P16619 AL645728.2-202ENST00000641679 227 ntBASIC12.67□□□□□ -0.38
CCL3L1P16619 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CCL3L1P16619 KRT8P22-201ENST00000562317 1415 ntBASIC12.67□□□□□ -0.38
CCL3L1P16619 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3L1P16619 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL3L1P16619 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3L1P16619 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3L1P16619 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CCL3L1P16619 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CCL3L1P16619 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
CCL3L1P16619 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms