Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 C1QBPP1-201ENST00000400117 770 ntBASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 GOLGA2P4-201ENST00000441462 777 ntBASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 FTH1P14-201ENST00000482930 551 ntBASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 TCAF2P1-201ENST00000291129 2421 ntBASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 TARDBPP1-201ENST00000442013 1203 ntBASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC19.79■□□□□ 0.76
PDZRN3Q9UPQ7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 AC074338.1-201ENST00000416825 156 ntBASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 PHKG1P2-201ENST00000457537 863 ntBASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 CLUHP6-201ENST00000580789 941 ntBASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 AL450472.2-201ENST00000603663 1156 ntBASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 AC097359.3-201ENST00000603982 1210 ntBASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PDZRN3Q9UPQ7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 AC134312.5-201ENST00000568031 1313 ntBASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 CICP24-201ENST00000605464 2705 ntBASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 MST1L-201ENST00000442552 2185 ntBASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms