Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 FAM210CP-201ENST00000445714 574 ntBASIC14.55□□□□□ -0.08
NR1H4Q96RI1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 BNIP3P18-201ENST00000593976 575 ntBASIC14.55□□□□□ -0.08
NR1H4Q96RI1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 AC004241.5-201ENST00000623870 2448 ntBASIC14.55□□□□□ -0.08
NR1H4Q96RI1 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 AC018892.3-201ENST00000623986 2499 ntBASIC14.54□□□□□ -0.08
NR1H4Q96RI1 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 RPL5P21-201ENST00000404620 815 ntBASIC14.54□□□□□ -0.08
NR1H4Q96RI1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.54□□□□□ -0.08
NR1H4Q96RI1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 AP000867.4-201ENST00000641616 219 ntBASIC14.54□□□□□ -0.08
NR1H4Q96RI1 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 AC016397.2-201ENST00000624848 1985 ntBASIC14.54□□□□□ -0.08
NR1H4Q96RI1 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
NR1H4Q96RI1 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms