Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 AL157414.3-201ENST00000624276 1954 ntBASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 ACTG1P2-201ENST00000415776 1125 ntBASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 ACTG1P11-201ENST00000425411 1125 ntBASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 AC104073.2-201ENST00000453737 312 ntBASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 TMEM198B-204ENST00000484016 896 ntBASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 MARK2P5-201ENST00000507649 634 ntBASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 RN7SL574P-201ENST00000581512 297 ntBASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 AC005324.6-201ENST00000587972 613 ntBASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 AC138696.2-201ENST00000607376 223 ntBASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 AC068587.8-201ENST00000641239 219 ntBASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NPAS4Q8IUM7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 MST1L-201ENST00000442552 2185 ntBASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 FXNP2-201ENST00000411625 547 ntBASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 AC134698.3-201ENST00000523880 214 ntBASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms