Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LRRC28Q86X40 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRC28Q86X40 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
LRRC28Q86X40 AC010327.5-201ENST00000586923 3061 ntBASIC13.77□□□□□ -0.2
LRRC28Q86X40 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRRC28Q86X40 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRRC28Q86X40 ST20-AS1-201ENST00000560255 4223 ntBASIC13.77□□□□□ -0.2
LRRC28Q86X40 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRRC28Q86X40 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRRC28Q86X40 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRRC28Q86X40 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRRC28Q86X40 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC28Q86X40 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC28Q86X40 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC28Q86X40 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC28Q86X40 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
LRRC28Q86X40 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC28Q86X40 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC28Q86X40 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
LRRC28Q86X40 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC28Q86X40 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC28Q86X40 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC28Q86X40 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC28Q86X40 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.77□□□□□ -0.21
LRRC28Q86X40 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.77□□□□□ -0.21
LRRC28Q86X40 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC28Q86X40 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC28Q86X40 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC28Q86X40 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.77□□□□□ -0.21
LRRC28Q86X40 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC28Q86X40 AC142381.1-201ENST00000426099 345 ntBASIC13.77□□□□□ -0.21
LRRC28Q86X40 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.77□□□□□ -0.21
LRRC28Q86X40 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.77□□□□□ -0.21
LRRC28Q86X40 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC28Q86X40 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.77□□□□□ -0.21
LRRC28Q86X40 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.77□□□□□ -0.21
LRRC28Q86X40 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.77□□□□□ -0.21
LRRC28Q86X40 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.77□□□□□ -0.21
LRRC28Q86X40 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LRRC28Q86X40 AC069262.1-201ENST00000539058 672 ntBASIC13.77□□□□□ -0.21
LRRC28Q86X40 AC026150.2-201ENST00000564693 1156 ntBASIC13.77□□□□□ -0.21
LRRC28Q86X40 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.77□□□□□ -0.21
LRRC28Q86X40 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.77□□□□□ -0.21
LRRC28Q86X40 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.77□□□□□ -0.21
LRRC28Q86X40 AC015911.4-201ENST00000588022 1070 ntBASIC13.77□□□□□ -0.21
LRRC28Q86X40 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.77□□□□□ -0.21
LRRC28Q86X40 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC28Q86X40 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.77□□□□□ -0.21
LRRC28Q86X40 AC005252.3-201ENST00000623855 2258 ntBASIC13.77□□□□□ -0.21
LRRC28Q86X40 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.77□□□□□ -0.21
LRRC28Q86X40 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC28Q86X40 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.77□□□□□ -0.21
LRRC28Q86X40 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.77□□□□□ -0.21
LRRC28Q86X40 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC28Q86X40 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC28Q86X40 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC28Q86X40 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC28Q86X40 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC28Q86X40 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC28Q86X40 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC28Q86X40 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC28Q86X40 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC28Q86X40 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC28Q86X40 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC28Q86X40 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC28Q86X40 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC28Q86X40 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC28Q86X40 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC28Q86X40 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC28Q86X40 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 SPDYE7P-202ENST00000420373 878 ntBASIC13.76□□□□□ -0.21
LRRC28Q86X40 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 AC067863.1-201ENST00000494933 530 ntBASIC13.76□□□□□ -0.21
LRRC28Q86X40 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 AC098859.1-201ENST00000502915 1238 ntBASIC13.76□□□□□ -0.21
LRRC28Q86X40 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC28Q86X40 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 SPTSSB-204ENST00000617024 1292 ntBASIC13.76□□□□□ -0.21
LRRC28Q86X40 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC28Q86X40 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms