Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 TUBB8P8-201ENST00000458717 1058 ntBASIC10.44□□□□□ -0.74
CSMD3Q7Z407 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 ALG1L6P-201ENST00000515248 758 ntBASIC10.44□□□□□ -0.74
CSMD3Q7Z407 PHBP15-201ENST00000574228 665 ntBASIC10.44□□□□□ -0.74
CSMD3Q7Z407 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 AC009560.1-201ENST00000620208 434 ntBASIC10.44□□□□□ -0.74
CSMD3Q7Z407 AC138466.5-201ENST00000624002 808 ntBASIC10.44□□□□□ -0.74
CSMD3Q7Z407 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 AL138725.1-201ENST00000407347 1314 ntBASIC10.44□□□□□ -0.74
CSMD3Q7Z407 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 RN7SKP230-201ENST00000365642 335 ntBASIC10.44□□□□□ -0.74
CSMD3Q7Z407 ACTBP7-201ENST00000418351 1124 ntBASIC10.44□□□□□ -0.74
CSMD3Q7Z407 AC078875.1-201ENST00000431907 724 ntBASIC10.44□□□□□ -0.74
CSMD3Q7Z407 AL157407.1-201ENST00000435784 904 ntBASIC10.44□□□□□ -0.74
CSMD3Q7Z407 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 CR383656.3-201ENST00000551315 183 ntBASIC10.44□□□□□ -0.74
CSMD3Q7Z407 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 AC107464.3-201ENST00000609172 737 ntBASIC10.44□□□□□ -0.74
CSMD3Q7Z407 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 AQP7P5-201ENST00000428759 1049 ntBASIC10.43□□□□□ -0.74
CSMD3Q7Z407 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 AQP7P4-201ENST00000447083 1042 ntBASIC10.43□□□□□ -0.74
CSMD3Q7Z407 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 AQP7P2-201ENST00000453967 1041 ntBASIC10.43□□□□□ -0.74
CSMD3Q7Z407 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 AQP7P3-201ENST00000624547 1041 ntBASIC10.43□□□□□ -0.74
CSMD3Q7Z407 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 DDX39AP1-201ENST00000445147 1181 ntBASIC10.43□□□□□ -0.74
CSMD3Q7Z407 LINC00634-202ENST00000505157 222 ntBASIC10.43□□□□□ -0.74
CSMD3Q7Z407 AP000911.2-201ENST00000534330 502 ntBASIC10.43□□□□□ -0.74
CSMD3Q7Z407 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 KRT8P31-201ENST00000504812 1408 ntBASIC10.43□□□□□ -0.74
CSMD3Q7Z407 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 CICP6-201ENST00000457191 2729 ntBASIC10.43□□□□□ -0.74
CSMD3Q7Z407 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 CICP13-201ENST00000422015 2789 ntBASIC10.43□□□□□ -0.74
CSMD3Q7Z407 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 AC018463.1-201ENST00000456674 917 ntBASIC10.43□□□□□ -0.74
CSMD3Q7Z407 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 AL645728.2-202ENST00000641679 227 ntBASIC10.43□□□□□ -0.74
CSMD3Q7Z407 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CSMD3Q7Z407 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CSMD3Q7Z407 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
CSMD3Q7Z407 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms