Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H3AP68431 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H3AP68431 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H3AP68431 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H3AP68431 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H3AP68431 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H3AP68431 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H3AP68431 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H3AP68431 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H3AP68431 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
HIST1H3AP68431 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
HIST1H3AP68431 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H3AP68431 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.46□□□□□ -0.26
HIST1H3AP68431 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
HIST1H3AP68431 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H3AP68431 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 MEP1AP4-201ENST00000423244 1087 ntBASIC13.45□□□□□ -0.26
HIST1H3AP68431 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 RN7SL399P-201ENST00000471648 279 ntBASIC13.45□□□□□ -0.26
HIST1H3AP68431 AC004066.1-201ENST00000502488 802 ntBASIC13.45□□□□□ -0.26
HIST1H3AP68431 RNA5SP421-201ENST00000516864 134 ntBASIC13.45□□□□□ -0.26
HIST1H3AP68431 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 AL662799.1-202ENST00000614205 422 ntBASIC13.45□□□□□ -0.26
HIST1H3AP68431 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST1H3AP68431 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H3AP68431 FGD5P1-202ENST00000614866 2498 ntBASIC13.45□□□□□ -0.26
HIST1H3AP68431 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H3AP68431 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H3AP68431 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H3AP68431 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.44□□□□□ -0.26
HIST1H3AP68431 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
HIST1H3AP68431 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H3AP68431 AC093525.8-201ENST00000624099 1342 ntBASIC13.44□□□□□ -0.26
HIST1H3AP68431 CICP23-201ENST00000605013 2741 ntBASIC13.44□□□□□ -0.26
HIST1H3AP68431 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.44□□□□□ -0.26
HIST1H3AP68431 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.44□□□□□ -0.26
HIST1H3AP68431 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H3AP68431 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.44□□□□□ -0.26
HIST1H3AP68431 AL161772.1-201ENST00000610494 4412 ntBASIC13.44□□□□□ -0.26
HIST1H3AP68431 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.44□□□□□ -0.26
HIST1H3AP68431 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.44□□□□□ -0.26
HIST1H3AP68431 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
HIST1H3AP68431 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.44□□□□□ -0.26
HIST1H3AP68431 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H3AP68431 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H3AP68431 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
HIST1H3AP68431 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HIST1H3AP68431 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.44□□□□□ -0.26
HIST1H3AP68431 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HIST1H3AP68431 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms