Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF1P30408 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF1P30408 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF1P30408 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF1P30408 AC020916.1-201ENST00000587762 1774 ntBASIC18.73■□□□□ 0.59
TM4SF1P30408 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF1P30408 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TM4SF1P30408 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF1P30408 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF1P30408 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF1P30408 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF1P30408 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC18.73■□□□□ 0.59
TM4SF1P30408 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF1P30408 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.73■□□□□ 0.59
TM4SF1P30408 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC18.73■□□□□ 0.59
TM4SF1P30408 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF1P30408 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC18.73■□□□□ 0.59
TM4SF1P30408 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC18.73■□□□□ 0.59
TM4SF1P30408 MIR6720-201ENST00000611664 98 ntBASIC18.73■□□□□ 0.59
TM4SF1P30408 AL157813.1-201ENST00000612996 587 ntBASIC18.73■□□□□ 0.59
TM4SF1P30408 MIR6756-201ENST00000616240 63 ntBASIC18.73■□□□□ 0.59
TM4SF1P30408 AC009084.3-201ENST00000623356 437 ntBASIC18.73■□□□□ 0.59
TM4SF1P30408 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC18.73■□□□□ 0.59
TM4SF1P30408 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF1P30408 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF1P30408 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF1P30408 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
TM4SF1P30408 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF1P30408 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF1P30408 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TM4SF1P30408 CYP51A1P3-201ENST00000400072 1428 ntBASIC18.73■□□□□ 0.59
TM4SF1P30408 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.73■□□□□ 0.59
TM4SF1P30408 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF1P30408 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF1P30408 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF1P30408 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.73■□□□□ 0.59
TM4SF1P30408 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
TM4SF1P30408 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.73■□□□□ 0.59
TM4SF1P30408 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF1P30408 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF1P30408 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.72■□□□□ 0.59
TM4SF1P30408 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
TM4SF1P30408 AC105250.1-201ENST00000509378 2057 ntBASIC18.72■□□□□ 0.59
TM4SF1P30408 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF1P30408 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF1P30408 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.72■□□□□ 0.59
TM4SF1P30408 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF1P30408 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC18.72■□□□□ 0.59
TM4SF1P30408 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TM4SF1P30408 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF1P30408 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
TM4SF1P30408 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC18.72■□□□□ 0.59
TM4SF1P30408 AL031713.1-201ENST00000564813 661 ntBASIC18.72■□□□□ 0.59
TM4SF1P30408 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC18.72■□□□□ 0.59
TM4SF1P30408 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC18.72■□□□□ 0.59
TM4SF1P30408 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF1P30408 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.72■□□□□ 0.59
TM4SF1P30408 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF1P30408 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TM4SF1P30408 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF1P30408 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF1P30408 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF1P30408 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.72■□□□□ 0.59
TM4SF1P30408 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.72■□□□□ 0.59
TM4SF1P30408 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.71■□□□□ 0.59
TM4SF1P30408 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF1P30408 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF1P30408 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TM4SF1P30408 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF1P30408 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF1P30408 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF1P30408 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.71■□□□□ 0.59
TM4SF1P30408 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.71■□□□□ 0.59
TM4SF1P30408 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF1P30408 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF1P30408 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TM4SF1P30408 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF1P30408 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.71■□□□□ 0.59
TM4SF1P30408 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF1P30408 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF1P30408 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF1P30408 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TM4SF1P30408 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC18.71■□□□□ 0.59
TM4SF1P30408 RPL8P2-201ENST00000430538 502 ntBASIC18.71■□□□□ 0.59
TM4SF1P30408 AL157407.1-201ENST00000435784 904 ntBASIC18.71■□□□□ 0.59
TM4SF1P30408 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC18.71■□□□□ 0.59
TM4SF1P30408 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC18.71■□□□□ 0.59
TM4SF1P30408 AC008723.1-201ENST00000506922 207 ntBASIC18.71■□□□□ 0.59
TM4SF1P30408 PTK2-225ENST00000520892 571 ntTSL 4 BASIC18.71■□□□□ 0.59
TM4SF1P30408 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF1P30408 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC18.71■□□□□ 0.59
TM4SF1P30408 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC18.71■□□□□ 0.59
TM4SF1P30408 NAT9-220ENST00000582870 896 ntTSL 5 BASIC18.71■□□□□ 0.59
TM4SF1P30408 RPL17P45-201ENST00000586289 509 ntBASIC18.71■□□□□ 0.59
TM4SF1P30408 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.71■□□□□ 0.59
TM4SF1P30408 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF1P30408 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC18.71■□□□□ 0.59
TM4SF1P30408 MIR6769A-201ENST00000617340 73 ntBASIC18.71■□□□□ 0.59
TM4SF1P30408 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC18.71■□□□□ 0.59
TM4SF1P30408 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms