Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
SPTA1P02549 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SPTA1P02549 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.88□□□□□ -0.19
SPTA1P02549 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.88□□□□□ -0.19
SPTA1P02549 AC106794.1-201ENST00000506935 792 ntBASIC13.88□□□□□ -0.19
SPTA1P02549 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.88□□□□□ -0.19
SPTA1P02549 MIR4683-201ENST00000579659 81 ntBASIC13.88□□□□□ -0.19
SPTA1P02549 EIF5AP2-201ENST00000585668 1047 ntBASIC13.88□□□□□ -0.19
SPTA1P02549 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.88□□□□□ -0.19
SPTA1P02549 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.88□□□□□ -0.19
SPTA1P02549 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.88□□□□□ -0.19
SPTA1P02549 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.88□□□□□ -0.19
SPTA1P02549 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.88□□□□□ -0.19
SPTA1P02549 PCDH8P1-201ENST00000428983 2773 ntBASIC13.88□□□□□ -0.19
SPTA1P02549 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
SPTA1P02549 AP002414.2-201ENST00000591780 3365 ntBASIC13.88□□□□□ -0.19
SPTA1P02549 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.88□□□□□ -0.19
SPTA1P02549 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 LRRC59-203ENST00000576448 1531 ntBASIC13.88□□□□□ -0.19
SPTA1P02549 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SPTA1P02549 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.88□□□□□ -0.19
SPTA1P02549 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SPTA1P02549 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SPTA1P02549 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.88□□□□□ -0.19
SPTA1P02549 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SPTA1P02549 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.88□□□□□ -0.19
SPTA1P02549 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC13.88□□□□□ -0.19
SPTA1P02549 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC13.88□□□□□ -0.19
SPTA1P02549 AC019193.1-201ENST00000506678 823 ntBASIC13.88□□□□□ -0.19
SPTA1P02549 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.88□□□□□ -0.19
SPTA1P02549 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC13.88□□□□□ -0.19
SPTA1P02549 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.88□□□□□ -0.19
SPTA1P02549 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.88□□□□□ -0.19
SPTA1P02549 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTA1P02549 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.87□□□□□ -0.19
SPTA1P02549 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC13.87□□□□□ -0.19
SPTA1P02549 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SPTA1P02549 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.87□□□□□ -0.19
SPTA1P02549 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.87□□□□□ -0.19
SPTA1P02549 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SPTA1P02549 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.87□□□□□ -0.19
SPTA1P02549 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.87□□□□□ -0.19
SPTA1P02549 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.87□□□□□ -0.19
SPTA1P02549 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.87□□□□□ -0.19
SPTA1P02549 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC13.87□□□□□ -0.19
SPTA1P02549 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.87□□□□□ -0.19
SPTA1P02549 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 ENPP7P14-201ENST00000621765 1040 ntBASIC13.87□□□□□ -0.19
SPTA1P02549 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
SPTA1P02549 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.87□□□□□ -0.19
SPTA1P02549 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
SPTA1P02549 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SPTA1P02549 AC148477.4-201ENST00000613430 1793 ntBASIC13.87□□□□□ -0.19
SPTA1P02549 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTA1P02549 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SPTA1P02549 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms