Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL5O76039 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.89■□□□□ 0.45
CDKL5O76039 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL5O76039 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CDKL5O76039 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.89■□□□□ 0.45
CDKL5O76039 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.89■□□□□ 0.45
CDKL5O76039 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.89■□□□□ 0.45
CDKL5O76039 LINC00528-201ENST00000600723 2160 ntBASIC17.89■□□□□ 0.45
CDKL5O76039 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL5O76039 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.88■□□□□ 0.45
CDKL5O76039 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL5O76039 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL5O76039 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CDKL5O76039 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL5O76039 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CDKL5O76039 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.88■□□□□ 0.45
CDKL5O76039 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL5O76039 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL5O76039 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CDKL5O76039 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL5O76039 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL5O76039 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL5O76039 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.88■□□□□ 0.45
CDKL5O76039 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL5O76039 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.88■□□□□ 0.45
CDKL5O76039 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL5O76039 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL5O76039 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.88■□□□□ 0.45
CDKL5O76039 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.88■□□□□ 0.45
CDKL5O76039 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.88■□□□□ 0.45
CDKL5O76039 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CDKL5O76039 AC107373.2-201ENST00000607735 490 ntBASIC17.88■□□□□ 0.45
CDKL5O76039 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CDKL5O76039 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL5O76039 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CDKL5O76039 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL5O76039 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CDKL5O76039 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL5O76039 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL5O76039 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
CDKL5O76039 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL5O76039 AL161772.1-201ENST00000610494 4412 ntBASIC17.88■□□□□ 0.45
CDKL5O76039 ACE3P-201ENST00000423435 1973 ntBASIC17.88■□□□□ 0.45
CDKL5O76039 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL5O76039 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
CDKL5O76039 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.88■□□□□ 0.45
CDKL5O76039 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CDKL5O76039 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL5O76039 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CDKL5O76039 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL5O76039 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL5O76039 AC013726.1-201ENST00000563747 2285 ntBASIC17.87■□□□□ 0.45
CDKL5O76039 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL5O76039 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.87■□□□□ 0.45
CDKL5O76039 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CDKL5O76039 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL5O76039 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.87■□□□□ 0.45
CDKL5O76039 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL5O76039 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL5O76039 FAM207CP-201ENST00000443486 507 ntBASIC17.87■□□□□ 0.45
CDKL5O76039 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL5O76039 VDAC1P7-201ENST00000462417 847 ntBASIC17.87■□□□□ 0.45
CDKL5O76039 BRI3BPP1-201ENST00000594224 787 ntBASIC17.87■□□□□ 0.45
CDKL5O76039 AC093813.1-201ENST00000605066 256 ntBASIC17.87■□□□□ 0.45
CDKL5O76039 AC093726.1-201ENST00000608064 963 ntBASIC17.87■□□□□ 0.45
CDKL5O76039 AL662799.1-202ENST00000614205 422 ntBASIC17.87■□□□□ 0.45
CDKL5O76039 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CDKL5O76039 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL5O76039 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL5O76039 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL5O76039 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL5O76039 AL391825.1-201ENST00000457671 1364 ntBASIC17.87■□□□□ 0.45
CDKL5O76039 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CDKL5O76039 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.87■□□□□ 0.45
CDKL5O76039 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL5O76039 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.87■□□□□ 0.45
CDKL5O76039 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CDKL5O76039 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CDKL5O76039 AC068418.2-201ENST00000577309 3703 ntBASIC17.87■□□□□ 0.45
CDKL5O76039 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.87■□□□□ 0.45
CDKL5O76039 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL5O76039 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CDKL5O76039 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL5O76039 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL5O76039 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL5O76039 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.87■□□□□ 0.45
CDKL5O76039 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL5O76039 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL5O76039 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL5O76039 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL5O76039 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL5O76039 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL5O76039 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.86■□□□□ 0.45
CDKL5O76039 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL5O76039 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.86■□□□□ 0.45
CDKL5O76039 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CDKL5O76039 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CDKL5O76039 AL645937.2-201ENST00000396808 931 ntBASIC17.86■□□□□ 0.45
CDKL5O76039 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.86■□□□□ 0.45
CDKL5O76039 TSPY16P-201ENST00000449843 468 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms