Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 CICP11-201ENST00000434745 2827 ntBASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 AC008741.2-201ENST00000612792 3115 ntBASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 Z97180.1-201ENST00000445173 988 ntBASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 EEF1DP6-201ENST00000449232 372 ntBASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 RN7SL774P-201ENST00000577467 290 ntBASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 AL133499.1-201ENST00000596207 608 ntBASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 AL353726.2-201ENST00000623259 884 ntBASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM7Q9NR12 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PDLIM7Q9NR12 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
PDLIM7Q9NR12 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDLIM7Q9NR12 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDLIM7Q9NR12 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PDLIM7Q9NR12 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDLIM7Q9NR12 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.02■□□□□ 0.31
PDLIM7Q9NR12 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.02■□□□□ 0.31
PDLIM7Q9NR12 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PDLIM7Q9NR12 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.02■□□□□ 0.31
PDLIM7Q9NR12 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDLIM7Q9NR12 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 C18orf15-201ENST00000623680 2534 ntBASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 AL158070.2-201ENST00000623713 1621 ntBASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 AC114812.1-204ENST00000449669 728 ntBASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 AC005730.2-201ENST00000564549 1184 ntBASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 AC018635.2-201ENST00000608625 364 ntBASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 AC091544.8-201ENST00000619490 361 ntBASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PDLIM7Q9NR12 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM7Q9NR12 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM7Q9NR12 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM7Q9NR12 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms