Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 SPDYE19P-201ENST00000338590 713 ntBASIC13.93□□□□□ -0.18
USB1Q9BQ65 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 PHKG1P2-201ENST00000457537 863 ntBASIC13.93□□□□□ -0.18
USB1Q9BQ65 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 AC011495.1-201ENST00000498085 584 ntBASIC13.93□□□□□ -0.18
USB1Q9BQ65 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 AL132657.2-201ENST00000564417 358 ntBASIC13.93□□□□□ -0.18
USB1Q9BQ65 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 AC239800.4-201ENST00000603712 296 ntBASIC13.93□□□□□ -0.18
USB1Q9BQ65 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 AC012645.4-201ENST00000610691 1061 ntBASIC13.93□□□□□ -0.18
USB1Q9BQ65 AC004461.2-201ENST00000629517 803 ntBASIC13.93□□□□□ -0.18
USB1Q9BQ65 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 AL109936.8-201ENST00000641772 604 ntBASIC13.93□□□□□ -0.18
USB1Q9BQ65 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 SLC7A15P-201ENST00000424028 1363 ntBASIC13.93□□□□□ -0.18
USB1Q9BQ65 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 AC006449.6-201ENST00000612330 2296 ntBASIC13.93□□□□□ -0.18
USB1Q9BQ65 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
USB1Q9BQ65 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
USB1Q9BQ65 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 ZNF736P1Y-201ENST00000440402 1276 ntBASIC13.92□□□□□ -0.18
USB1Q9BQ65 GAPDHP21-201ENST00000450301 1010 ntBASIC13.92□□□□□ -0.18
USB1Q9BQ65 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 AL031058.1-201ENST00000561592 888 ntBASIC13.92□□□□□ -0.18
USB1Q9BQ65 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 AC023908.3-201ENST00000564211 3047 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms