Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASD1Q96PB1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASD1Q96PB1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASD1Q96PB1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CASD1Q96PB1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASD1Q96PB1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASD1Q96PB1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASD1Q96PB1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASD1Q96PB1 AL359258.3-201ENST00000622910 2331 ntBASIC16.22■□□□□ 0.19
CASD1Q96PB1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CASD1Q96PB1 AC092850.2-201ENST00000623821 2697 ntBASIC16.22■□□□□ 0.19
CASD1Q96PB1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASD1Q96PB1 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASD1Q96PB1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASD1Q96PB1 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASD1Q96PB1 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CASD1Q96PB1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASD1Q96PB1 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASD1Q96PB1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASD1Q96PB1 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 AC104073.2-201ENST00000453737 312 ntBASIC16.21■□□□□ 0.19
CASD1Q96PB1 TUBB8P8-201ENST00000458717 1058 ntBASIC16.21■□□□□ 0.19
CASD1Q96PB1 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 AC245884.6-201ENST00000515672 1067 ntBASIC16.21■□□□□ 0.19
CASD1Q96PB1 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 AC005324.6-201ENST00000587972 613 ntBASIC16.21■□□□□ 0.19
CASD1Q96PB1 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 AC009955.4-201ENST00000597192 544 ntBASIC16.21■□□□□ 0.19
CASD1Q96PB1 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASD1Q96PB1 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASD1Q96PB1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASD1Q96PB1 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASD1Q96PB1 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CASD1Q96PB1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CASD1Q96PB1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CASD1Q96PB1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CASD1Q96PB1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CASD1Q96PB1 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.2■□□□□ 0.18
CASD1Q96PB1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.2■□□□□ 0.18
CASD1Q96PB1 AC004899.1-201ENST00000424687 1714 ntBASIC16.2■□□□□ 0.18
CASD1Q96PB1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.2■□□□□ 0.18
CASD1Q96PB1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASD1Q96PB1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASD1Q96PB1 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.2■□□□□ 0.18
CASD1Q96PB1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASD1Q96PB1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASD1Q96PB1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASD1Q96PB1 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASD1Q96PB1 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.2■□□□□ 0.18
CASD1Q96PB1 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.2■□□□□ 0.18
CASD1Q96PB1 RN7SL11P-201ENST00000471305 293 ntBASIC16.2■□□□□ 0.18
CASD1Q96PB1 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CASD1Q96PB1 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.2■□□□□ 0.18
CASD1Q96PB1 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.2■□□□□ 0.18
CASD1Q96PB1 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.2■□□□□ 0.18
CASD1Q96PB1 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.2■□□□□ 0.18
CASD1Q96PB1 AC013355.1-201ENST00000562625 723 ntBASIC16.2■□□□□ 0.18
CASD1Q96PB1 RN7SL163P-201ENST00000583100 276 ntBASIC16.2■□□□□ 0.18
CASD1Q96PB1 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.2■□□□□ 0.18
CASD1Q96PB1 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CASD1Q96PB1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CASD1Q96PB1 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASD1Q96PB1 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASD1Q96PB1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.2■□□□□ 0.18
CASD1Q96PB1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.2■□□□□ 0.18
CASD1Q96PB1 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CASD1Q96PB1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CASD1Q96PB1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASD1Q96PB1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CASD1Q96PB1 AC011840.2-201ENST00000563063 1520 ntBASIC16.19■□□□□ 0.18
CASD1Q96PB1 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASD1Q96PB1 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.19■□□□□ 0.18
CASD1Q96PB1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASD1Q96PB1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASD1Q96PB1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASD1Q96PB1 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms