Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNE4Q8N205 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNE4Q8N205 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNE4Q8N205 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.95■□□□□ 0.62
SYNE4Q8N205 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNE4Q8N205 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNE4Q8N205 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNE4Q8N205 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNE4Q8N205 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNE4Q8N205 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC18.95■□□□□ 0.62
SYNE4Q8N205 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18.95■□□□□ 0.62
SYNE4Q8N205 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
SYNE4Q8N205 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SYNE4Q8N205 REXO1L4P-201ENST00000605109 1937 ntBASIC18.95■□□□□ 0.62
SYNE4Q8N205 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYNE4Q8N205 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYNE4Q8N205 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.95■□□□□ 0.62
SYNE4Q8N205 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNE4Q8N205 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNE4Q8N205 AC008741.2-201ENST00000612792 3115 ntBASIC18.95■□□□□ 0.62
SYNE4Q8N205 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC18.95■□□□□ 0.62
SYNE4Q8N205 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYNE4Q8N205 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNE4Q8N205 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNE4Q8N205 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SYNE4Q8N205 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNE4Q8N205 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNE4Q8N205 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.94■□□□□ 0.62
SYNE4Q8N205 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SYNE4Q8N205 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNE4Q8N205 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNE4Q8N205 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNE4Q8N205 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNE4Q8N205 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNE4Q8N205 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNE4Q8N205 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
SYNE4Q8N205 RPL5P21-201ENST00000404620 815 ntBASIC18.94■□□□□ 0.62
SYNE4Q8N205 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNE4Q8N205 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC18.94■□□□□ 0.62
SYNE4Q8N205 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNE4Q8N205 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SYNE4Q8N205 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC18.94■□□□□ 0.62
SYNE4Q8N205 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
SYNE4Q8N205 ZACNP1-201ENST00000612259 710 ntBASIC18.94■□□□□ 0.62
SYNE4Q8N205 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SYNE4Q8N205 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNE4Q8N205 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.94■□□□□ 0.62
SYNE4Q8N205 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNE4Q8N205 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNE4Q8N205 AC020910.5-201ENST00000623668 1865 ntBASIC18.94■□□□□ 0.62
SYNE4Q8N205 FKBP4P6-201ENST00000457486 1332 ntBASIC18.94■□□□□ 0.62
SYNE4Q8N205 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNE4Q8N205 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNE4Q8N205 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNE4Q8N205 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNE4Q8N205 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SYNE4Q8N205 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNE4Q8N205 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNE4Q8N205 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
SYNE4Q8N205 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.93■□□□□ 0.62
SYNE4Q8N205 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNE4Q8N205 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNE4Q8N205 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNE4Q8N205 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNE4Q8N205 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNE4Q8N205 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNE4Q8N205 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.93■□□□□ 0.62
SYNE4Q8N205 RPS2P36-201ENST00000456516 831 ntBASIC18.93■□□□□ 0.62
SYNE4Q8N205 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC18.93■□□□□ 0.62
SYNE4Q8N205 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC18.93■□□□□ 0.62
SYNE4Q8N205 AC245884.6-201ENST00000515672 1067 ntBASIC18.93■□□□□ 0.62
SYNE4Q8N205 NCK2-206ENST00000522586 490 ntTSL 5 BASIC18.93■□□□□ 0.62
SYNE4Q8N205 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNE4Q8N205 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.93■□□□□ 0.62
SYNE4Q8N205 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNE4Q8N205 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNE4Q8N205 SPCS2P2-201ENST00000603270 608 ntBASIC18.93■□□□□ 0.62
SYNE4Q8N205 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC18.93■□□□□ 0.62
SYNE4Q8N205 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNE4Q8N205 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
SYNE4Q8N205 AC091812.3-201ENST00000621362 345 ntBASIC18.93■□□□□ 0.62
SYNE4Q8N205 AC022748.3-201ENST00000621828 275 ntBASIC18.93■□□□□ 0.62
SYNE4Q8N205 AC128714.1-201ENST00000637035 887 ntBASIC18.93■□□□□ 0.62
SYNE4Q8N205 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SYNE4Q8N205 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
SYNE4Q8N205 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNE4Q8N205 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNE4Q8N205 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNE4Q8N205 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNE4Q8N205 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNE4Q8N205 PKD1P1-201ENST00000458669 6805 ntBASIC18.93■□□□□ 0.62
SYNE4Q8N205 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNE4Q8N205 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNE4Q8N205 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNE4Q8N205 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SYNE4Q8N205 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNE4Q8N205 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNE4Q8N205 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNE4Q8N205 PAUPAR-201ENST00000630360 2965 ntBASIC18.93■□□□□ 0.62
SYNE4Q8N205 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms