Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 FO393414.2-201ENST00000405153 598 ntBASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 TARDBPP1-201ENST00000442013 1203 ntBASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 SPDYE11-202ENST00000450699 704 ntBASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 RPL13AP23-201ENST00000480739 586 ntBASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 SLC25A39P2-201ENST00000537614 270 ntBASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 BANF1P1-201ENST00000553684 263 ntBASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 RARRES2P9-201ENST00000565168 469 ntBASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 SPDYE9P-201ENST00000570642 692 ntBASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 AC026120.1-201ENST00000611536 926 ntBASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 SPDYE10P-202ENST00000612005 668 ntBASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 SPDYE8P-202ENST00000612377 668 ntBASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 AC012508.2-201ENST00000567613 1472 ntBASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 REXO1L4P-201ENST00000605109 1937 ntBASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 FAM58CP-201ENST00000435741 640 ntBASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 IGHV3-62-201ENST00000520057 340 ntBASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms