Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 AC093214.1-201ENST00000511688 1107 ntBASIC13.47□□□□□ -0.25
HIST1H3AP68431 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 DRD5P1-201ENST00000456605 1438 ntBASIC13.47□□□□□ -0.25
HIST1H3AP68431 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H3AP68431 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H3AP68431 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H3AP68431 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H3AP68431 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H3AP68431 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H3AP68431 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H3AP68431 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H3AP68431 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H3AP68431 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H3AP68431 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H3AP68431 CICP24-201ENST00000605464 2705 ntBASIC13.46□□□□□ -0.25
HIST1H3AP68431 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H3AP68431 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H3AP68431 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 CYMP-203ENST00000474680 1263 ntBASIC13.46□□□□□ -0.25
HIST1H3AP68431 FAM86LP-201ENST00000478302 853 ntBASIC13.46□□□□□ -0.25
HIST1H3AP68431 AC026410.3-201ENST00000514280 936 ntBASIC13.46□□□□□ -0.25
HIST1H3AP68431 DOC2GP-202ENST00000514950 1163 ntBASIC13.46□□□□□ -0.25
HIST1H3AP68431 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 AC023310.3-201ENST00000557027 670 ntBASIC13.46□□□□□ -0.25
HIST1H3AP68431 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 AC100756.1-201ENST00000562736 682 ntBASIC13.46□□□□□ -0.25
HIST1H3AP68431 RRP7BP-205ENST00000566851 833 ntBASIC13.46□□□□□ -0.25
HIST1H3AP68431 AC138749.3-201ENST00000567691 622 ntBASIC13.46□□□□□ -0.25
HIST1H3AP68431 AC036164.1-201ENST00000570544 333 ntBASIC13.46□□□□□ -0.25
HIST1H3AP68431 AC116165.1-201ENST00000611806 668 ntBASIC13.46□□□□□ -0.25
HIST1H3AP68431 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H3AP68431 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H3AP68431 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
HIST1H3AP68431 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H3AP68431 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H3AP68431 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms