Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
APOC4P55056 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 RPS15-201ENST00000233609 534 ntTSL 2 BASIC11.28□□□□□ -0.6
APOC4P55056 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
APOC4P55056 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
APOC4P55056 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC11.28□□□□□ -0.6
APOC4P55056 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 GZMB-202ENST00000382540 816 ntTSL 5 BASIC11.28□□□□□ -0.6
APOC4P55056 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
APOC4P55056 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC11.28□□□□□ -0.6
APOC4P55056 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC11.28□□□□□ -0.6
APOC4P55056 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC11.28□□□□□ -0.6
APOC4P55056 CTBP2P5-201ENST00000454986 1264 ntBASIC11.28□□□□□ -0.6
APOC4P55056 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
APOC4P55056 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC11.28□□□□□ -0.6
APOC4P55056 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC11.28□□□□□ -0.6
APOC4P55056 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC11.28□□□□□ -0.6
APOC4P55056 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC11.28□□□□□ -0.6
APOC4P55056 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC11.28□□□□□ -0.6
APOC4P55056 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC11.28□□□□□ -0.6
APOC4P55056 RPS15-205ENST00000586686 562 ntTSL 5 BASIC11.28□□□□□ -0.6
APOC4P55056 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC11.28□□□□□ -0.6
APOC4P55056 RPS15-208ENST00000591804 711 ntTSL 5 BASIC11.28□□□□□ -0.6
APOC4P55056 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC11.28□□□□□ -0.6
APOC4P55056 RPS24-214ENST00000613865 538 ntTSL 5 BASIC11.28□□□□□ -0.6
APOC4P55056 LARP4-220ENST00000615080 856 ntTSL 5 BASIC11.28□□□□□ -0.6
APOC4P55056 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
APOC4P55056 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 AP005117.1-202ENST00000581724 1908 ntBASIC11.28□□□□□ -0.6
APOC4P55056 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC11.28□□□□□ -0.6
APOC4P55056 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
APOC4P55056 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
APOC4P55056 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 AL391005.1-201ENST00000623953 2435 ntBASIC11.28□□□□□ -0.6
APOC4P55056 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC11.28□□□□□ -0.6
APOC4P55056 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 USE1-206ENST00000595101 1776 ntTSL 2 BASIC11.28□□□□□ -0.6
APOC4P55056 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC11.28□□□□□ -0.6
APOC4P55056 OR2I1P-210ENST00000642037 4691 ntBASIC11.28□□□□□ -0.6
APOC4P55056 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
APOC4P55056 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
APOC4P55056 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.27□□□□□ -0.6
APOC4P55056 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
APOC4P55056 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
APOC4P55056 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC11.27□□□□□ -0.6
APOC4P55056 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
APOC4P55056 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
APOC4P55056 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
APOC4P55056 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
APOC4P55056 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
APOC4P55056 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC11.27□□□□□ -0.6
APOC4P55056 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC11.27□□□□□ -0.6
APOC4P55056 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
APOC4P55056 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC11.27□□□□□ -0.6
APOC4P55056 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC11.27□□□□□ -0.61
APOC4P55056 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC11.27□□□□□ -0.61
APOC4P55056 DOC2GP-204ENST00000639052 2548 ntBASIC11.27□□□□□ -0.61
APOC4P55056 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOC4P55056 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOC4P55056 AC026691.1-201ENST00000602502 2017 ntBASIC11.27□□□□□ -0.61
APOC4P55056 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOC4P55056 PDIA3P1-201ENST00000471856 1510 ntBASIC11.27□□□□□ -0.61
APOC4P55056 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOC4P55056 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOC4P55056 APOC3-202ENST00000375345 604 ntTSL 5 BASIC11.27□□□□□ -0.61
APOC4P55056 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC11.27□□□□□ -0.61
APOC4P55056 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC11.27□□□□□ -0.61
APOC4P55056 FAM21FP-201ENST00000426241 1131 ntBASIC11.27□□□□□ -0.61
APOC4P55056 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC11.27□□□□□ -0.61
APOC4P55056 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC11.27□□□□□ -0.61
APOC4P55056 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC11.27□□□□□ -0.61
APOC4P55056 CROCCP4-201ENST00000457096 498 ntBASIC11.27□□□□□ -0.61
APOC4P55056 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC11.27□□□□□ -0.61
APOC4P55056 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC11.27□□□□□ -0.61
APOC4P55056 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC11.27□□□□□ -0.61
APOC4P55056 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.27□□□□□ -0.61
APOC4P55056 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC11.27□□□□□ -0.61
APOC4P55056 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
APOC4P55056 RPSAP52-203ENST00000622976 1023 ntBASIC11.27□□□□□ -0.61
APOC4P55056 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC11.27□□□□□ -0.61
APOC4P55056 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
APOC4P55056 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOC4P55056 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOC4P55056 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOC4P55056 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOC4P55056 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC11.27□□□□□ -0.61
APOC4P55056 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
APOC4P55056 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms