Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.92■□□□□ 0.3
LBX1P52954 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LBX1P52954 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LBX1P52954 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LBX1P52954 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.92■□□□□ 0.3
LBX1P52954 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LBX1P52954 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LBX1P52954 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.92■□□□□ 0.3
LBX1P52954 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.92■□□□□ 0.3
LBX1P52954 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.92■□□□□ 0.3
LBX1P52954 AL121949.3-201ENST00000406684 385 ntBASIC16.92■□□□□ 0.3
LBX1P52954 AHCYP3-201ENST00000420053 1279 ntBASIC16.92■□□□□ 0.3
LBX1P52954 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.92■□□□□ 0.3
LBX1P52954 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.92■□□□□ 0.3
LBX1P52954 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.92■□□□□ 0.3
LBX1P52954 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC16.92■□□□□ 0.3
LBX1P52954 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC16.92■□□□□ 0.3
LBX1P52954 HNRNPA1P16-201ENST00000575692 955 ntBASIC16.92■□□□□ 0.3
LBX1P52954 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.92■□□□□ 0.3
LBX1P52954 AC008972.2-201ENST00000606587 494 ntBASIC16.92■□□□□ 0.3
LBX1P52954 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC16.92■□□□□ 0.3
LBX1P52954 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LBX1P52954 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.92■□□□□ 0.3
LBX1P52954 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LBX1P52954 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.92■□□□□ 0.3
LBX1P52954 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LBX1P52954 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LBX1P52954 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LBX1P52954 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.92■□□□□ 0.3
LBX1P52954 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.92■□□□□ 0.3
LBX1P52954 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.92■□□□□ 0.3
LBX1P52954 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LBX1P52954 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LBX1P52954 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LBX1P52954 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LBX1P52954 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LBX1P52954 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LBX1P52954 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LBX1P52954 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LBX1P52954 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LBX1P52954 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LBX1P52954 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LBX1P52954 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC16.91■□□□□ 0.3
LBX1P52954 XBP1P1-201ENST00000436573 652 ntBASIC16.91■□□□□ 0.3
LBX1P52954 SCARNA12-201ENST00000459155 270 ntBASIC16.91■□□□□ 0.3
LBX1P52954 AC108724.1-201ENST00000481669 352 ntBASIC16.91■□□□□ 0.3
LBX1P52954 RN7SL288P-201ENST00000490496 291 ntBASIC16.91■□□□□ 0.3
LBX1P52954 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC16.91■□□□□ 0.3
LBX1P52954 RNA5SP406-201ENST00000516106 112 ntBASIC16.91■□□□□ 0.3
LBX1P52954 AC090136.2-201ENST00000517809 420 ntBASIC16.91■□□□□ 0.3
LBX1P52954 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LBX1P52954 RN7SL602P-201ENST00000578326 324 ntBASIC16.91■□□□□ 0.3
LBX1P52954 RN7SL718P-201ENST00000581254 303 ntBASIC16.91■□□□□ 0.3
LBX1P52954 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC16.91■□□□□ 0.3
LBX1P52954 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
LBX1P52954 AC008764.6-201ENST00000595909 2069 ntBASIC16.91■□□□□ 0.3
LBX1P52954 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.91■□□□□ 0.3
LBX1P52954 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LBX1P52954 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LBX1P52954 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LBX1P52954 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
LBX1P52954 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LBX1P52954 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LBX1P52954 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LBX1P52954 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.91■□□□□ 0.3
LBX1P52954 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LBX1P52954 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LBX1P52954 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
LBX1P52954 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.9■□□□□ 0.3
LBX1P52954 AC018629.1-201ENST00000623381 1736 ntBASIC16.9■□□□□ 0.3
LBX1P52954 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LBX1P52954 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LBX1P52954 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LBX1P52954 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LBX1P52954 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.9■□□□□ 0.3
LBX1P52954 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LBX1P52954 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.9■□□□□ 0.3
LBX1P52954 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
LBX1P52954 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LBX1P52954 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LBX1P52954 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LBX1P52954 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC16.9■□□□□ 0.3
LBX1P52954 AC092570.1-201ENST00000414446 469 ntBASIC16.9■□□□□ 0.3
LBX1P52954 AC098657.1-201ENST00000416270 1135 ntBASIC16.9■□□□□ 0.3
LBX1P52954 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC16.9■□□□□ 0.3
LBX1P52954 EEF1DP5-201ENST00000431410 772 ntBASIC16.9■□□□□ 0.3
LBX1P52954 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.9■□□□□ 0.3
LBX1P52954 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC16.9■□□□□ 0.3
LBX1P52954 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC16.9■□□□□ 0.3
LBX1P52954 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.9■□□□□ 0.3
LBX1P52954 OR5BD1P-201ENST00000532527 817 ntBASIC16.9■□□□□ 0.3
LBX1P52954 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC16.9■□□□□ 0.3
LBX1P52954 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC16.9■□□□□ 0.3
LBX1P52954 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.9■□□□□ 0.3
LBX1P52954 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC16.9■□□□□ 0.3
LBX1P52954 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.9■□□□□ 0.3
LBX1P52954 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LBX1P52954 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LBX1P52954 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LBX1P52954 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms