Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
CDKN1AP38936 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDKN1AP38936 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.18□□□□□ -0.3
CDKN1AP38936 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.18□□□□□ -0.3
CDKN1AP38936 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDKN1AP38936 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDKN1AP38936 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.18□□□□□ -0.3
CDKN1AP38936 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDKN1AP38936 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDKN1AP38936 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CDKN1AP38936 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.18□□□□□ -0.3
CDKN1AP38936 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.18□□□□□ -0.3
CDKN1AP38936 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.18□□□□□ -0.3
CDKN1AP38936 KRT18P25-201ENST00000508931 1278 ntBASIC13.18□□□□□ -0.3
CDKN1AP38936 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.18□□□□□ -0.3
CDKN1AP38936 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDKN1AP38936 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
CDKN1AP38936 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.18□□□□□ -0.3
CDKN1AP38936 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.18□□□□□ -0.3
CDKN1AP38936 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.18□□□□□ -0.3
CDKN1AP38936 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.18□□□□□ -0.3
CDKN1AP38936 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDKN1AP38936 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDKN1AP38936 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDKN1AP38936 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CDKN1AP38936 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.18□□□□□ -0.3
CDKN1AP38936 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDKN1AP38936 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDKN1AP38936 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDKN1AP38936 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CDKN1AP38936 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CDKN1AP38936 AC020907.1-201ENST00000616460 1350 ntBASIC13.18□□□□□ -0.3
CDKN1AP38936 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDKN1AP38936 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDKN1AP38936 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDKN1AP38936 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDKN1AP38936 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.18□□□□□ -0.3
CDKN1AP38936 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDKN1AP38936 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDKN1AP38936 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.17□□□□□ -0.3
CDKN1AP38936 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.17□□□□□ -0.3
CDKN1AP38936 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.17□□□□□ -0.3
CDKN1AP38936 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CDKN1AP38936 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.17□□□□□ -0.3
CDKN1AP38936 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.17□□□□□ -0.3
CDKN1AP38936 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CDKN1AP38936 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CDKN1AP38936 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.17□□□□□ -0.3
CDKN1AP38936 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.17□□□□□ -0.3
CDKN1AP38936 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 ACKR1-201ENST00000368121 1240 ntBASIC13.17□□□□□ -0.3
CDKN1AP38936 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CDKN1AP38936 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.17□□□□□ -0.3
CDKN1AP38936 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.17□□□□□ -0.3
CDKN1AP38936 BCYRN1-201ENST00000418539 200 ntBASIC13.17□□□□□ -0.3
CDKN1AP38936 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.17□□□□□ -0.3
CDKN1AP38936 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 FAM197Y7-201ENST00000432892 766 ntBASIC13.17□□□□□ -0.3
CDKN1AP38936 AC245100.3-201ENST00000441281 285 ntBASIC13.17□□□□□ -0.3
CDKN1AP38936 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.17□□□□□ -0.3
CDKN1AP38936 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.17□□□□□ -0.3
CDKN1AP38936 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.17□□□□□ -0.3
CDKN1AP38936 AC025279.2-201ENST00000569730 653 ntBASIC13.17□□□□□ -0.3
CDKN1AP38936 MIR4313-201ENST00000580760 101 ntBASIC13.17□□□□□ -0.3
CDKN1AP38936 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 AC091271.1-201ENST00000611877 1162 ntBASIC13.17□□□□□ -0.3
CDKN1AP38936 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CDKN1AP38936 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
CDKN1AP38936 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
CDKN1AP38936 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.17□□□□□ -0.3
CDKN1AP38936 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CDKN1AP38936 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.17□□□□□ -0.3
CDKN1AP38936 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN1AP38936 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CDKN1AP38936 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.17□□□□□ -0.3
CDKN1AP38936 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CDKN1AP38936 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.17□□□□□ -0.3
CDKN1AP38936 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms