Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL1A1P02452 GGCT-203ENST00000409144 836 ntTSL 2 BASIC18.23■□□□□ 0.51
COL1A1P02452 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.23■□□□□ 0.51
COL1A1P02452 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC18.23■□□□□ 0.51
COL1A1P02452 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC18.23■□□□□ 0.51
COL1A1P02452 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL1A1P02452 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC18.23■□□□□ 0.51
COL1A1P02452 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
COL1A1P02452 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL1A1P02452 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.23■□□□□ 0.51
COL1A1P02452 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC18.23■□□□□ 0.51
COL1A1P02452 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL1A1P02452 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL1A1P02452 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL1A1P02452 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
COL1A1P02452 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
COL1A1P02452 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
COL1A1P02452 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL1A1P02452 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL1A1P02452 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL1A1P02452 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL1A1P02452 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
COL1A1P02452 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL1A1P02452 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC18.23■□□□□ 0.51
COL1A1P02452 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
COL1A1P02452 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL1A1P02452 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
COL1A1P02452 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.22■□□□□ 0.51
COL1A1P02452 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL1A1P02452 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.22■□□□□ 0.51
COL1A1P02452 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL1A1P02452 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL1A1P02452 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC18.22■□□□□ 0.51
COL1A1P02452 AL008707.1-201ENST00000422498 534 ntBASIC18.22■□□□□ 0.51
COL1A1P02452 HNRNPA1P63-201ENST00000427917 963 ntBASIC18.22■□□□□ 0.51
COL1A1P02452 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.22■□□□□ 0.51
COL1A1P02452 IMP3P2-201ENST00000489760 475 ntBASIC18.22■□□□□ 0.51
COL1A1P02452 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL1A1P02452 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC18.22■□□□□ 0.51
COL1A1P02452 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC18.22■□□□□ 0.51
COL1A1P02452 BCL2-203ENST00000589955 5011 ntBASIC18.22■□□□□ 0.51
COL1A1P02452 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL1A1P02452 AC009955.4-201ENST00000597192 544 ntBASIC18.22■□□□□ 0.51
COL1A1P02452 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
COL1A1P02452 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.22■□□□□ 0.51
COL1A1P02452 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL1A1P02452 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.22■□□□□ 0.51
COL1A1P02452 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL1A1P02452 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL1A1P02452 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.22■□□□□ 0.51
COL1A1P02452 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL1A1P02452 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
COL1A1P02452 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL1A1P02452 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL1A1P02452 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL1A1P02452 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL1A1P02452 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
COL1A1P02452 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC18.21■□□□□ 0.51
COL1A1P02452 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC18.21■□□□□ 0.51
COL1A1P02452 AC245884.6-201ENST00000515672 1067 ntBASIC18.21■□□□□ 0.51
COL1A1P02452 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18.21■□□□□ 0.51
COL1A1P02452 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.21■□□□□ 0.51
COL1A1P02452 AC097724.1-201ENST00000609581 426 ntBASIC18.21■□□□□ 0.51
COL1A1P02452 AC022748.3-201ENST00000621828 275 ntBASIC18.21■□□□□ 0.51
COL1A1P02452 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC18.21■□□□□ 0.51
COL1A1P02452 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC18.21■□□□□ 0.51
COL1A1P02452 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.21■□□□□ 0.51
COL1A1P02452 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC18.21■□□□□ 0.51
COL1A1P02452 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.21■□□□□ 0.51
COL1A1P02452 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.21■□□□□ 0.51
COL1A1P02452 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
COL1A1P02452 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
COL1A1P02452 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL1A1P02452 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
COL1A1P02452 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
COL1A1P02452 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.21■□□□□ 0.5
COL1A1P02452 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
COL1A1P02452 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms