Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 FAM8A2P-201ENST00000528813 1142 ntBASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 AC015936.2-201ENST00000593177 259 ntBASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 AL645728.2-202ENST00000641679 227 ntBASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.42■□□□□ 0.06
PCDHB1Q9Y5F3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 AC104596.2-201ENST00000512793 793 ntBASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 RPSAP52-203ENST00000622976 1023 ntBASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms